Caloenas nicobarica (Nicobar pigeon): 136001703
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Entry
136001703 CDS
T11056
Symbol
SKIC3
Name
(RefSeq) superkiller complex protein 3 isoform X1
KO
K12600
superkiller protein 3
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
136001703 (SKIC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cnic03019
]
136001703 (SKIC3)
Messenger RNA biogenesis [BR:
cnic03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
136001703 (SKIC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_1
TPR_2
TPR_14
TPR_16
TPR_17
TPR_12
TPR_CcmH_CycH
TPR_11
TPR_8
TPR_9
ANAPC3
ARM_TT21_C
TPR_15
Fis1_TPR_C
TolB_N
ARM_TT21
BTAD
TPR_30
DUF928
TPR_5
TPR_20
Motif
Other DBs
NCBI-GeneID:
136001703
NCBI-ProteinID:
XP_065512361
LinkDB
All DBs
Position
Z:complement(83984666..84036037)
Genome browser
AA seq
1562 aa
AA seq
DB search
MSNKEVKAVLKSAREAIRNKEYKEALKHCKAVLKQEKNNYNAWVFIGLAAAELDQPDQAK
GAYKKAIELEPNQLLAWQGLANLYEKPNQTDVKGDLADVYRKLLELYESGDKQKWYDVCN
KLVDLYHQEKKYLKVAETWQKLIQMKQEEGAEKAELHQLWKKMIQLLKDSTQTQDNKTEQ
SLLTAFEHAVNSADPVPGEDHQNLYKDFIQCLSKFPHESARLEKACNDMMALYPSASYPL
EVLCLHFVQSGTLSEEALQYISKLLEMDASSGPGIIGFGVKCLQEKKYKEAINSLTEGLQ
KTSQCPAAWHYLAEAQMKIHKHRDAVQSCNQALEALGTPEGPSLQWKNLILRLKAEALIK
IADADAAEEAIKALEQIVDASSDPVVLAVRGQAYLNKGLLDQASKISQELLLSHPDLAES
HALEGFIHYSQKNYEQAERSFLNAIERKAETAEYHQYLGLTYWFMSDETKKDKGKALTQF
LKAAKLDSYLGSVFCYLGNYYRDVAGDKSRARGCYKKAFELDGTDEESGTAAVDLSVELG
DMDTALSILNEVTQKASPGTAKWAWLHRGLYYLRTDQPSKAVADLQAALRADPKDSNCWE
SLGEAYLSRGSYATALKSFRRASELNPGLVYSIYRAAAIEQILGKYENAIATYKEILKKT
EDYVPALKGLGECYLMLSRAALDDYLDRKAVDYIELALEFFTRATKHRPDVSCLWKLLGD
TCTSVHVISPTKVNVQVQGSLLGKNADKQMLEKSELLILGGRCYGRALKLMALPSIWCDL
GINYYRQAEHLTAVGTDTNEISELLEKSLQCIKKAVRLDSKNHLYWNALGVVASCSAIGN
YALAQHSFIKSVQAEQINVVAWTNLGVLYLVTGNIEQAHEAFKIAQSLDPSYLLCWIGQA
FVAEKVGSYDTMDLFRHTTELGMHTEGAKGYAHWVCSTLQDKSNRNTELYRYNIVEMNAI
PAAQVVLTKYTERNPDDASAFTMLGYLSEYLHLKRQAADAYERAAALLKDSEDTEKYYTA
MQNYGRSLCALGQCDKAIEVYTSTPLTEFDGIVGKALAYFKKGLLQESTKAYEKALSVAE
SEQDKAHILTALAIIEYKQNKVDAAKTLLFKCSLKEPSTESLKALCTLGLVKQDATLATA
ALKELLKHEKGDDGIYERCLIASAVYALQGKNVAVQREISRVIHRNPDNPALWSLLSRLV
PLYASRKAKGGARAGNITHVLDLNHGKEALLNIAVNQLAAGCHMLEDKKNNPLKNIQKAI
HLCPDNPAAWAVLMAACHAENTIVCLNNTQPKQTDLEMTLVSTISAKTGESNLPRNYIQT
LEDWCLCQAITSLEEAGKLSEAEALCTKGLKSYPDHPALFLLLRQVQCQQLLQSHKELPD
NVLEELRKTVMASSTSVAAWQWLAKVYQSQRMMVGAEMCYRKSLQLASQQGSWHGKLSSL
LRLAMLALEVCMANVSNDHWPSLVHEATTEALKLTPCPLATLLQALLQYNRKMGARETRR
MLERVVYQPGNPETIVSVARWYLLRHLHAKDDYELIDVLIENAKANGDVRVLELNEKLSS
SA
NT seq
4689 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaataaggaggtgaaggcagtattaaagagtgccagagaagcaatacgaaataaa
gaatataaggaagccttaaaacattgcaaggcagtcttgaagcaagaaaaaaataactac
aatgcctgggtatttattggcctggcagctgctgagttagaccagcctgatcaggccaaa
ggagcatataaaaaggctattgaacttgaaccaaaccagttactggcatggcagggatta
gcaaatttatatgagaaacccaaccaaacagatgtcaaaggagacttagcagatgtttac
cgaaagctcttagaactctatgaaagtggtgacaagcaaaaatggtatgatgtgtgtaac
aagcttgtggacctgtatcatcaagagaagaaatatttaaaggtggctgaaacatggcag
aaactaatccaaatgaaacaggaggaaggtgcagaaaaagcagagcttcatcagctttgg
aagaagatgatccagttactgaaagacagtacacagacccaggataataagactgagcag
tcgcttttgactgcatttgaacatgcggtgaactctgctgaccctgttcctggtgaagac
caccagaatctttacaaggactttattcagtgcttgtcaaaatttcctcacgaatcagct
agattggaaaaggcctgtaatgatatgatggctttgtatccttctgcgagttatccttta
gaagtactttgcttgcactttgttcagtcaggtactttgtcagaagaggccctgcagtat
atttctaagcttttggagatggacgcaagtagtggtccaggcatcattggttttggtgta
aaatgcctccaagaaaagaaatacaaggaggctattaatagtcttactgaaggtttgcag
aagactagccagtgtccagcagcatggcattatctggcagaggcacagatgaaaattcac
aaacacagggatgctgtccagtcctgcaatcaagctcttgaggctcttggaactcctgag
ggtcccagtcttcagtggaagaaccttatccttcggttgaaagcagaggctttgattaaa
atagctgatgctgatgctgcagaagaagccattaaagcacttgagcagatcgtggatgca
agcagtgatccggtagttttagctgtcagaggtcaggcttatctaaacaaaggtttattg
gatcaagcttccaagatctcacaagagcttctgttgtcccaccctgatctcgccgagtcc
catgctctagagggtttcatccattactcccagaagaactatgaacaggcagaaagaagt
ttcttaaatgctattgaaagaaaggctgaaactgcagagtatcatcagtacctgggactc
acatactggttcatgagtgatgagacaaagaaagacaaaggaaaagcactcactcagttc
ttgaaggctgcaaaattggacagctacttgggaagtgtcttttgttatttaggtaactac
tacagagatgttgctggcgacaaaagtagagctcgtggttgctataaaaaggcttttgag
ctggatggaactgatgaagaatctggaacagcagctgtagacttaagtgtggaacttgga
gacatggacactgctctgtccatcctgaatgaggtaactcaaaaagcgagtcctggtaca
gcaaaatgggcctggcttcatcgtggactttactacctgagaactgatcagccatcaaaa
gcagtggctgatttgcaggcagctctcagggctgatccaaaggattccaactgctgggag
tctctgggggaggcttacttgagcagaggtagctatgcaacagctctaaaatctttcaga
agagcaagtgagctgaacccaggccttgtgtacagcatttacagagctgcagcaattgag
cagattctaggcaaatacgaaaatgctatagctacctataaggaaatcttgaagaagaca
gaagactatgtgcctgcactgaaaggacttggtgagtgctatctcatgctgtcaagagca
gcccttgatgactatcttgataggaaggcagtggattacatagaactggctcttgaattt
tttacaagggcaacaaagcaccgtcctgatgtatcttgcctctggaaactgctgggagat
acctgtactagcgtgcatgttatttcaccaaccaaagtgaatgttcaagttcaaggatcc
cttctgggtaaaaatgcagacaaacagatgctggagaaaagtgagctgctcatactggga
ggaaggtgttatggcagagctttaaaattgatggctctgcctagcatatggtgtgatctt
ggaataaattattatcgacaagcagagcacctcacagcagtgggcactgacacaaatgag
atcagtgaactgctagagaagtctttacagtgtatcaaaaaagctgtgaggcttgacagc
aaaaatcatctttattggaatgcacttggtgtagtcgcttcctgtagtgctattgggaat
tatgctcttgctcaacattcgttcatcaaatctgttcaagctgagcaaattaatgttgtt
gcctggactaacttgggggttttgtatctggtaactggaaacattgagcaagctcatgaa
gccttcaagatagcccagtctctggacccttcttacttactgtgttggattggacaggct
tttgttgcagaaaaggtaggcagctatgatactatggatctcttcaggcacacaactgaa
ctcggtatgcataccgagggagcaaaaggctacgcccactgggtatgttcaacactgcag
gataaaagcaacagaaacactgaactatatcggtacaacattgttgaaatgaatgctatt
ccagcagcccaggtggtcttgaccaaatatacagaaagaaatccagacgatgcatctgct
ttcacaatgcttggttatttgagtgagtatctgcatctaaaaagacaggcagcagatgcc
tatgagagggcagctgcattactgaaagactctgaggatactgagaagtattatacagca
atgcaaaactatggcaggtcactctgtgcccttggtcagtgtgataaggccattgaggtt
tacacatcaacacccttgaccgagtttgatggcattgtggggaaagcattagcctacttc
aagaaagggctcttacaagaaagtacaaaagcctatgaaaaagccttgtctgttgctgag
tctgaacaagataaggcacatatcctgactgccttggcaataatagagtataaacagaac
aaagtggatgctgcaaagacactgctgtttaaatgctcgttaaaggaacctagtacggaa
agtctgaaggctttgtgcacactgggactggtaaagcaggatgctacgcttgcaacagca
gccctaaaagaattgctgaagcatgaaaaaggggatgatggaatttacgagaggtgcctt
attgcatctgctgtttatgctttgcaaggtaaaaatgtggcagtccagagagaaatctcc
agagtaatacacaggaaccctgataatcctgccctctggtctctcctgtctcgactagtt
ccactgtatgcatcacgaaaagcaaaaggaggagctagggcaggaaacatcacacatgta
cttgatctaaaccatggaaaggaagccctgctgaatattgcagttaatcagttggcagca
ggatgtcacatgttagaagataagaaaaacaatcctctgaaaaatattcagaaggcaatc
cacctctgtccagataatcctgctgcctgggcagtgctaatggcagcctgtcatgctgaa
aacaccatcgtctgcctaaacaacactcagccaaagcaaacagatctagagatgacactt
gtatctacaatttcagccaaaactggagaaagtaaccttccacgtaattatatccagact
cttgaggactggtgtctatgtcaggctattaccagtctagaggaggctggtaaactctcc
gaggctgaagctctttgtaccaagggtttaaaaagctaccctgaccacccagctctgttt
ttgcttctgagacaagttcagtgtcagcagctgctgcagtctcacaaagaacttccagac
aacgtcctggaggagcttcgcaagacggtcatggccagttccacttcagtggcagcctgg
caatggctggcaaaagtgtatcagtctcagaggatgatggttggagcagagatgtgttac
aggaagagtctgcagttggcgtcacagcagggcagctggcatgggaagttatccagtctg
ctcaggctagctatgctagcactggaagtctgcatggctaatgtctccaatgaccactgg
ccatctttggttcatgaggcaacaactgaagccttgaaactcactccttgtccgctggca
actctcctacaagcacttctacagtataatcgcaaaatgggagcaagggagactcgtcga
atgttggagagagtggtatatcaaccaggaaatccagaaaccatagtgtcagtggcacgc
tggtacctcttgcgacacctgcatgccaaagatgattatgaactaatagatgtacttata
gaaaatgccaaagctaatggggatgttagagttctggaactaaatgagaaattgtcatca
agtgcctag
DBGET
integrated database retrieval system
