Chionomys nivalis (European snow vole): 130863741
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Entry
130863741 CDS
T11437
Symbol
Cnot1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
cnl Chionomys nivalis (European snow vole)
Pathway
cnl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130863741 (Cnot1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cnl03019
]
130863741 (Cnot1)
Messenger RNA biogenesis [BR:
cnl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
130863741 (Cnot1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
130863741 (Cnot1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
130863741
NCBI-ProteinID:
XP_057609962
LinkDB
All DBs
Position
21:30642406..30721849
Genome browser
AA seq
2383 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIDNPLHYQKSLKPAPHLFAQLSKVLK
LSKVQEVIFGLALLNSSSSDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGVAKTMMESSLADFMQEVGYGFCASIEECRNIIMQFGVREVTAAQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKSEGAQAHTWNVEVLIDVLKELNPSLNFKEVTYE
LDHPGFQIRDSKGLHNVVYGIQRGLGMEVFPVDFIYRPWKHAEGQLSFIQHSLINPEVFC
FADYPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPAETLATMLACLQACAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMSKGRPPSASSLDAISPVQIDPLGGMASL
SIGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTPNQTTAFSGIGGLSSQLPVGG
LGTGSLTGIGTGALGLPAVNNDPFVQRKLGTSGLNQPTFQQSKMKPSDLSQVWPEANQHF
SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSTIKREREVFNCMLRNLFEEYR
FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFGSKMYYFGIAALDR
FKNRLKDYPQYCQHLASISHFMQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQA
QAQAQVPAKAPLAGQVNTMVTTSTTTTVAKTVTVTKPTGVSFKKDVPPSINTTNIDTLLV
ATDQTERIVEPPENIQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVS
IEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLG
MITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSIRSLVFRPPNPWTM
AIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGNLLKDKDRLKNLDEQLSAPK
KDVKQPEELPAITTTTTSTTPATSTTCTATVPPQPQYSYHDINVYSLAGLAPHITLNPTI
PLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRIA
AHHMMRNLTAGMAMITCREPLLMSISTNLKNSFASALRTASPQQREMMDQAAAQLAQDNC
ELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRLK
VGGVDPKQLAVYEEFARNVPGFLPTNDLSQPTGFLAQPMKQAWATDDVAQIYDKCITELE
QHLHAIPPTLAMNPQAQALRSLLEVVVLSRNSRDAIAALGLLQKAVEGLLDATSGADADL
LLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQ
QYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHITEADLFHTIETLMRINAHSRG
NAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWV
NLYHSAAAGRDSTKAFSAFVGQVELLERKMHQQGILKTDDLITRFFRLCTEMCVEISYRA
QAEQQHNPAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGV
LLQDHDVRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPG
FVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILYK
GTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVD
MLSEINIAPRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYNLQ
LINALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQ
LRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNP
AFKFWNHEFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7152 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
accaagaaaaactaccgagccagccagcaggaaatacagcatattgtgaatcggcacggt
cctgaggcagacaggcatttattacgctgtctattttcacatgtggatttcagtggcgat
ggtaaaagcagtggcaaagatttccatcagacacagtttctgattcaggagtgtgcctcg
ctgattacaaagccaaattttatctcgacattgtcatatgccattgataatccattgcac
taccagaagagtctaaaacctgcaccccatttatttgcccagctgagtaaagttctcaag
ttaagtaaagtacaagaggtaatttttggtcttgccctattgaattcttctagttcagat
ctcaggggttttgctgcccagtttataaaacagaagcttccagatcttctgcgttcttac
atagacgcagacgtcagtggaaatcaagaaggtggcttccaagatatagcaatagaggtc
ctacatctcctactctcccatctcctctttgggcagaagggagcctttggagttggacag
gagcaaatagacgcttttcttaagacactgcgcagagattttccccaagaacgttgtcct
gtggtgcttgcaccacttttataccctgaaaaacgggacattctaatggacaggatcttg
cctgactctggaggggtagctaaaaccatgatggagagctctctggctgatttcatgcaa
gaagtaggctatggcttttgtgcaagtattgaagaatgtcgcaatataatcatgcagttt
ggtgttcgggaggtcacagctgcccaggttgccagggttttgggaatgatggctcgaact
cattcaggattaacagatggtattccattacagagcatctctgctcctggcagtgggatc
tggagtgacggaaaagataaaagtgaaggcgcacaggcacacacatggaatgtagaggtt
ttgattgatgttcttaaagaactgaacccgagtttgaatttcaaggaagtaacttatgaa
ctggaccatcctggatttcaaattcgtgacagcaaagggcttcataacgtggtttatggt
attcagaggggcctgggcatggaagtgtttccagtggatttcatatataggccttggaaa
catgcagaaggccagctctccttcatccagcattccctgataaacccagaggtcttctgc
tttgccgactacccctgtcatactgttgctactgacattttgaaagcgccaccagaggat
gacaatcgagaaattgccacatggaaaagcttggatttgattgagtctctgctgaggctt
gcagaggttgggcagtatgagcaagtgaaacaactcttcagcttccctatcaaacactgt
ccagacatgctggtattggccttactacaaatcaacacctcctggcacaccttacgccat
gaactcatctctactttgatgccaattttccttggaaaccatcctaactctgccattatt
ttgcactatgcatggcatggacagggacagtctccatcaattcgccaacttataatgcat
gcaatggcagaatggtacatgagaggggaacaatatgatcaggccaaattgtctcgaata
cttgacgtggcccaggacttgaaggccttgtcaatgctgctaaatggcactccatttgcc
tttgttattgaccttgctgcacttgcttcacgtcgtgaatacctcaaacttgacaagtgg
ctaacagataaaataagagaacatggggagccttttattcaggcatgcatgactttttta
aagagaaggtgcccttctattttgggtggacttgccccagagaaagatcaaccgaaaagt
gctcaacttcctgctgaaactctagcaacaatgttggcttgtctacaggcttgtgcaggg
agtgtttctcaggagttatcagagaccatcctcaccatggtagccaattgcagtaatgta
atgaataaggccagacagccaccacctggagttatgtcaaaaggtcgccctcctagtgct
agcagcttagatgccatttctcctgttcagattgaccctcttggtggaatggcatctctt
agtataggtggttcagctgcccctcacacacagagtatgcaaggttttcctccaaatttg
ggttctgcgttcagtactcctcagtcaccagcaaaagcatttccacctctttcaacccca
aatcaaacaaccgcattcagtggtatcggaggactttcatcccaacttccagtaggtggt
cttggcacaggaagcctgactggtataggaactggggcccttggacttcctgcagtgaac
aacgacccttttgtacagaggaaactgggcacctctggactcaaccagcctacattccag
cagagtaagatgaaaccttccgacttgtctcaggtgtggccagaggccaatcagcacttc
agtaaagagatagatgatgaagcaaacagctatttccagcgaatatataatcatccacca
catccaaccatgtccgttgatgaggtactagaaatgctacagagatttaaagactctact
ataaaaagggagcgagaagtatttaactgtatgctaaggaacttgtttgaagaatatcgg
tttttcccccagtaccctgataaagaattacatataacagcctgcctgtttggtggcata
attgaaaaaggactggtcacttacatggcattgggtctggccctgcgatatgttcttgaa
gccttacggaagccttttggatcaaaaatgtattattttggtattgctgcactagataga
tttaaaaatagattgaaggactatcctcagtattgtcagcacttggcttctattagtcac
tttatgcagtttccacatcatttgcaggagtatattgagtacggacagcagtctcgagat
cctcctgtgaagatgcagggctctatcacgacccctggaagtattgcactggctcaggcc
caggctcaggcccaggttccagcaaaagctcctcttgcgggtcaggttaacacaatggta
accacctcaacaacaaccactgttgctaaaacggttacagtcaccaagccaacgggagtc
agctttaagaaagatgtgccaccttctataaatacaacaaatatagatacattgcttgtg
gctacagatcaaaccgagaggattgtagagcccccagaaaatatccaagagaaaattgct
tttatcttcaacaacctctcacagtcaaacatgacccagaaggttgaagagcttaaagaa
accgtgaaggaagagtttatgccttgggtttcccagtatctagttatgaaaagagtcagt
attgagccaaactttcatagcctgtattccaactttcttgacacattgaagaatccagaa
tttaacaagatggttctgaatgaaacctacagaaacattaaagtgctgctgacctctgat
aaagctgcggccaatttctcagatcgttctttgctgaagaacttggggcattggctagga
atgatcacattagctaaaaataaacccattttgcacacggacttggatgtgaaatctttg
ctgctagaggcttatgttaaaggacaacaagagttgctttatgtagtgccctttgttgcc
aaagttctagagtccagcattcgtagtctggttttcagaccaccaaacccctggacaatg
gcaattatgaatgtattggctgagctacaccaagagcatgacttaaagttaaacttgaag
tttgagattgaggtgctctgtaagaaccttgcattagacatcaatgagctcaaacctgga
aacctactcaaagataaagaccgcctgaagaacttagatgaacaactctccgctccaaag
aaagacgtcaaacagccggaagagcttcctgccatcacaacgacaacaacttctacaaca
ccagctaccagtactacctgtacagccacagttccaccacagccacagtacagctaccac
gacatcaatgtctattctctggcaggcctggccccacacatcactctaaaccctacaata
cctttgtttcaggctcatccacagttgaagcaatgtgtgcggcaagcaattgaacgggct
gtccaggagctagttcatcctgtggtagatcggtcaattaagattgccatgactacttgt
gaacagatagtcagaaaggatttcgccctggattctgaggaatccagaatgcgaatagca
gctcatcacatgatgcggaacttgacagctggaatggctatgattacttgcagggagcct
ttactgatgagcatatctaccaacctaaaaaacagttttgcctcagcccttcgtactgca
tccccacaacaaagggaaatgatggaccaggctgctgctcagttagctcaggacaattgt
gaattagcttgctgttttattcagaaaactgcagtggagaaagcaggccctgagatggac
aagagattggcaactgaatttgagctgagaaaacatgctcggcaagaaggacgcagatac
tgtgatcctgttgtattaacatatcaagcggaacggatgccagagcaaatcaggctgaaa
gttggcggtgtggacccaaagcagctagccgtctatgaagagtttgcacgaaatgtgcct
ggcttcttacctacaaatgacttaagtcagcctacaggatttttagctcagcccatgaag
caagcttgggcaacagatgatgtagctcagatttatgataagtgtattacagaactggag
cagcacctacatgccattccaccaactctggccatgaatcctcaagcccaagctctacga
agtcttttggaggttgtagtgttgtctcgtaattctcgagatgcgatagctgctcttgga
ttacttcagaaggctgtagagggtttattagatgccacaagtggtgctgatgctgacctg
ctgctgcgatacagggaatgtcacctcttggtactaaaagctttgcaggatggcagggca
tatggatctccatggtgcaacaaacagatcacaaggtgcctaattgaatgtcgagatgaa
tataaatataatgtggaggctgtggagttgttaattcgaaatcatttggttaacatgcag
caatatgatcttcatctagctcagtcaatggagaatggcttaaactacatggccgtggca
tttgctatgcaactggtaaaaattctgctggtggatgaaaggagtgttgcccatattact
gaggcagatctattccataccattgaaaccctcatgaggattaatgctcattccagaggc
aatgctccagaaggattgccccagctgatggaagtagtgcgatccaactatgaagcaatg
attgatcgtgctcacggaggccctaactttatgatgcattctgggatctctcaagcctca
gaatatgatgaccctccaggcctgagggagaaggcagagtatcttctgagggaatgggtg
aatctataccattcagcagcagctggccgtgacagtaccaaagctttctctgcgtttgtt
ggacaggtagagcttttggaaagaaagatgcaccaacaaggaatacttaagactgatgac
ctcataacaaggttttttcgtctttgcactgaaatgtgtgttgaaatcagttaccgtgct
caagcagagcagcagcacaatcctgctgctaatcccaccatgatacgagccaagtgctat
cacaacctggatgcctttgtccgcctcattgcactgttagtgaagcactctggggaggcc
accaacactgtcacaaagatcaatctcctaaataaggttctcgggattgtggtgggagtt
ctcctacaggatcatgatgttcggcagagtgaatttcagcagcttccctaccataggatt
tttatcatgttgctgttggagctcaatgcacctgagcatgtgttggaaaccattaatttc
cagactcttacagctttctgcaatacattccacatcttaaggcctactaaagctcctggc
tttgtatatgcctggcttgaattgatctcccatcggatctttattgcaagaatgctggca
catacgccacagcagaaggggtggcctatgtatgcacagctgttgattgatttattcaaa
tatttagcgcctttccttagaaatgtggaactcactaaacctatgcaaatcctctataag
ggtactctaagagtgctgctagttcttttgcatgatttcccagagttcctttgtgattac
cattatgggttctgtgatgtgatccctcctaattgtatccagttaagaaatttgatcctg
agtgccttcccaagaaatatgaggctcccagacccattcactcctaacctgaaggtggac
atgctgagtgaaattaacattgcgcctcggatcctcaccaatttcactggagtgatgcca
cctcagttcaaaaaagatctggattcctatcttaaaactcgatcccctgtcacttttctg
tcggatctgcgcagtaacctacaggtatctaacgagcctggcaatcgctacaacctccag
cttatcaatgcactggtgctctatgtagggactcaggccatcgcacacatccacaacaag
ggcagcacgccttcaatgagcaccatcacccactcagcacacatggacatcttccagaat
ctggctgtggacttagacaccgagggccgatatctcttcttaaatgcaattgcaaaccag
ctgcggtacccaaacagccacactcactacttcagctgcaccatgctgtacctttttgcc
gaggcgaacaccgaggcaattcaggaacagatcacaagggttcttttggaacggttgatt
gtaaataggccgcatccttggggtcttcttatcaccttcattgagctgattaaaaaccca
gcatttaagttctggaaccatgagtttgtacactgtgccccagagattgaaaagttattc
caatctgttgcacagtgctgcatgggacagaaacaggctcagcaagtgatggaagggact
ggtgccagttag
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integrated database retrieval system
