Chionomys nivalis (European snow vole): 130864658
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Entry
130864658 CDS
T11437
Symbol
Clp1
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
cnl Chionomys nivalis (European snow vole)
Pathway
cnl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130864658 (Clp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cnl03019
]
130864658 (Clp1)
Enzymes [BR:
cnl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
130864658 (Clp1)
Messenger RNA biogenesis [BR:
cnl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
130864658 (Clp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
130864658
NCBI-ProteinID:
XP_057611317
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Position
22:1106739..1111347
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AA seq
425 aa
AA seq
DB search
MSEESNDDKKPTTKFELERETELRFEVEASQSVQLELLAGMAEIFGTELTRNKKFTFDAG
AKVAVFTWHGCSLQLSGRTEVAYVSKDTPMLLYLNTHTALEQMRRQAEKEEERGPRVMVV
GPTDVGKSTVCRLLLNYAVRLGRRPTYVELDVGQGSVSIPGTMGALYIERPADVEEGFSI
QAPLVYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASVSGCVINTCGWVKGSGYQ
ALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGVVERSKDFRRECRDER
IREYFYGFRGCFYPHAFNVKFSDVKIYKVGAPTIPDSCLPLGMSQEDNQLKLVPVTPGRD
MVHHLLSVSTAEGTEENLSETSVAGFIVVTSVDLEHQVFTVLSPAPRPLPKNFLLIMDIR
FMDLK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaggaatccaatgatgacaagaagccaacgactaaatttgaactggaacgagaa
acagagcttcgatttgaggtggaggcatctcagtcagttcagctcgagttgttggctggc
atggcagagatctttggcacagagctgaccagaaacaagaaattcacctttgatgctggt
gccaaggtggctgttttcacttggcatggctgttctctgcagttgagtggccgaaccgag
gtggcttatgtctctaaggacacacccatgttgctttacctcaacacgcatactgccttg
gagcagatgcggaggcaggcggaaaaggaagaagagcgaggcccccgcgtgatggttgtg
ggtcctactgatgtgggcaagtccacggtgtgccggctgctcctcaactacgcagtgcgc
ttgggccgccgacctacgtatgtggagctggatgtgggccagggctctgtgtccatccct
ggaaccatgggggccctctacatcgagcggcccgcagacgtggaggaaggtttctccatc
caggcccctcttgtgtatcattttggctccaccactcctggcaccaacattaagctttat
aataagattacgtctcgtttagccgacgtgttcaaccagcggtgtgaggtgaacagaagg
gcttccgtgagcggctgcgtcatcaacacctgcggctgggtcaagggctctgggtaccag
gccctggtgcacgcagcttcagccttcgaggtggacgtggtggtggttctggatcaagaa
cgactgtacaacgaactgaaaagggacctacctcattttgttcgaactgtgttgcttcca
aaatcagggggtgtggtagaacgctccaaggacttccggcgggaatgtagggatgagcgc
atccgtgagtatttctatggattccgaggctgtttctatccccatgccttcaatgtcaaa
ttttctgatgtgaaaatctacaaagttggggcacctaccatcccagactcctgtttacct
ctgggcatgtctcaggaagacaatcagctcaagttagtacctgtcacccctggcagagat
atggtgcaccatctcctgagtgtcagtaccgctgaggggacagaggagaacctttctgag
acaagtgtggctgggttcattgtggtgaccagtgtggatctggaacaccaggtgtttact
gtgctgtctccagccccccgcccgctgcctaagaactttcttctcatcatggacatccgg
ttcatggatctcaagtag
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