Chionomys nivalis (European snow vole): 130864795
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Entry
130864795 CDS
T11437
Symbol
Scn2a
Name
(RefSeq) sodium channel protein type 2 subunit alpha isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
cnl Chionomys nivalis (European snow vole)
Pathway
cnl04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09150 Organismal Systems
09157 Sensory system
04742 Taste transduction
130864795 (Scn2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cnl04040
]
130864795 (Scn2a)
Ion channels [BR:
cnl04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
130864795 (Scn2a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
130864795
NCBI-ProteinID:
XP_057611538
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Position
22:complement(16302597..16421241)
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AA seq
2006 aa
AA seq
DB search
MAQSVLVPPGPDSFRFFTRESLAAIEQRIAEEKAKRPKQERKDEDDENGPKPNSDLEAGK
SLPFIYGDIPPEMVSEPLEDLDPYYINKKTFIVLNKGKAISRFSATSALYILTPFNPIRK
LAIKILVHSLFNVLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFC
LEDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPENSTFEINITSFFNNSL
DWNGTAFNRTGNMFNWDEYIEDKSHFYFLEGQNDALLCGNSSDAGQCPEGYICVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQEEAQAAAAAASAESRDFSGAGGI
GVFSESSSVASKLSSKSEKELKNRRKKKKQKEQAGEEEKEDAVRKSASEDSIRKKGFRFS
LEGSRLTYEKRFSSPHQSLLSIRGSLFSPRRNSRASLFSFKGRVKDVGSENDFADDEHST
FEDNDSRRDSLFVPHRHGERRPSNVSQASRASRGIPTLPMNGKMHSAVDCNGVVSLVGGP
SALTSPVGQLLPEGTTTETEIRKRRSSSYHVSMDLLEDPTSRQRAMSMASILTNTMEELE
ESRQKCPPCWYKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAME
HYPMTEQFSSVLSVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFDGFIVSLSLMELG
LANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVG
MQLFGKSYKECVCKISNDCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTMC
LTVFMMVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVGRMQRGIDFVKR
KIREFIEKAFVRKQKALDEIKPLEDLNNKKDSCISNHTTIEIGKDLNYLKDGNGTTSGIG
SSVEKYVVDESDYMSFINNPSLTVTVPIAVGESDFENLNTEEFSSESDMEESKEKLNATS
SSEGSTVDIGAPAEGEQPEAEPEESLEPEACFTEDCVRKFKCCQISIEEGKGKLWWNLRK
TCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILEMLL
KWVAYGFQMYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSR
FEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCINYTTGDMFDVSV
VNNFSECQALIESNQTARWKNVKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSRNVEL
QPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYN
AMKKLGSKKPQKPIPRPANKFQGMVFDFVTKQVFDISIMILICLNMVTMMVETDDQSQEM
TNILYWINLVFIVLFTGECVLKLISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYF
VSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGM
SNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGPPDCDPEKDHPG
SSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMFY
EVWEKFDPDATQFIEFCKLSDFAAALDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDILF
AFTKRVLGESGEMDALRVQMEERFMASNPSKVSYEPITTTLKRKQEEVSAIVIQRAYRRY
LLKQKVKKVSSIYKKDKGKEGEGTPIKEDIVIDKLNENSTPEKTDVTPSTTSPPSYDSVT
KPEKEKFEKDKSEKEDKGKDIRESKK
NT seq
6021 nt
NT seq
+upstream
nt +downstream
nt
atggcacaatcagtgctggtaccgccaggacctgacagcttccgcttctttaccagggaa
tcccttgctgctattgaacaacgcattgcagaagagaaagccaagagacccaaacaggaa
cgcaaggacgaagatgacgaaaatggcccaaagccaaacagtgacttggaagcaggaaaa
tcccttccttttatttatggagacattcctccagagatggtgtcagagcccctggaggac
ctggacccctactatatcaataagaaaacctttatagtattgaataaagggaaagcaata
tctcggttcagtgccacctccgccctgtacatcctaactcccttcaaccccattagaaaa
ttagctattaagattttggtacattctttattcaatgtgctcatcatgtgcacgattctt
accaactgtgtatttatgaccatgagtaatcctccagactggacaaagaatgtggagtat
actttcacaggaatttatacttttgaatcacttattaaaatactcgcaaggggcttttgt
ctagaagatttcacatttctacgggacccctggaactggttggacttcacagttattact
tttgcatatgtgacagaatttgtggacctgggcaatgtctcagcgttgagaaccttcaga
gttctccgggcattgaaaaccatttcagtcattccaggcctgaagaccatcgtgggggcc
ctgatccagtcggtgaagaagctgtctgacgtcatgatcctcacggtgttctgtctcagt
gtctttgcactaatcgggctacagctcttcatgggcaacctgaggaataaatgcttgcag
tggcccccagaaaattctaccttcgaaataaatatcacttccttctttaataattcgttg
gactggaacggtactgccttcaatagaacagggaacatgtttaactgggatgaatacatt
gaagataaaagtcacttttattttttggaagggcagaacgatgctctgctttgtgggaac
agctcagacgcaggccagtgtcctgaagggtacatctgtgtgaaggctgggagaaacccc
aactacggctacacgagctttgacacatttagctgggccttcttgtctttatttcgtctc
atgactcaagacttctgggaaaacctttatcaactgaccctgcgagctgccgggaaaaca
tatatgatattttttgtgctcgtcattttcttgggctcattctacctgataaacttgatc
ctggctgtggtggccatggcctatgaggagcaaaatcaggccaccttggaggaggctgag
cagaaagaggcggagtttcagcagatgttggagcagctgaagaagcagcaggaggaggcg
caggcagcggccgcagccgcatctgcagaatccagggacttcagcggagcgggtgggata
ggtgtgttctcggagagttcttcagtagcctcaaagttgagttccaagagtgaaaaggag
ctgaaaaacagaagaaagaaaaagaaacagaaggagcaggctggggaggaagagaaggaa
gatgcagtgcggaaatctgcctctgaggacagcatacggaaaaaaggcttccggttttca
cttgaaggaagcaggctaacctatgagaagaggttttcctctccacaccagtctctgctg
agcatccgaggctcccttttctctccgaggcgcaacagtagagccagccttttcagcttc
aaaggtcgagtgaaggacgtggggtctgaaaatgacttcgccgacgatgaacacagcacg
tttgaggataacgacagcagaagagactctctgtttgtgccgcacagacacggagaaagg
cggcccagcaatgtcagccaggccagccgggcctcccgcggaatacccactctgcccatg
aacggaaagatgcacagtgcggtggactgcaatggtgtggtctctctggtcggaggcccc
tctgctctaacgtctcctgtggggcagctattgccagagggcacaactacggaaacggag
ataagaaagaggaggtccagttcttaccatgtttccatggacttgttggaagaccctaca
tcaaggcaaagagcaatgagtatggccagcattttgaccaacacaatggaagaacttgaa
gaatccagacagaaatgcccaccctgctggtataaatttgctaacatgtgcctgatttgg
gactgttgtaagccatggctaaaggtaaaacaccttgtcaatctggtagtgatggaccca
tttgttgacctggccatcaccatctgcattgtgttaaatacactcttcatggctatggag
cactaccccatgacggagcaattcagcagtgtgctgtctgtggggaatttggtcttcact
gggatcttcacagcagaaatgtttctcaagataatcgctatggatccatattattacttc
caagaaggctggaatatctttgatggatttattgtgagccttagtttaatggaactcggt
ctggccaacgtggaaggattgtcagttctccgatcattccggctgcttagagtcttcaag
ttggcaaaatcctggcccacactgaatatgctcatcaagatcatcggcaactcggtgggc
gccctgggcaacctgaccctggtgttggccatcatcgtcttcatcttcgccgtggttggc
atgcagctgtttggaaagagctacaaggaatgcgtctgcaagatttccaacgattgtgag
cttccacgctggcacatgcacgacttcttccactccttcctgatcgtgttccgcgtgctg
tgtggagagtggatagagaccatgtgggactgcatggaggtcgcgggccagaccatgtgt
ctcactgtcttcatgatggtcatggtgattggcaacctcgtggttctgaacctcttcttg
gccttgctcctcagctccttcagctctgacaaccttgccgccacagatgatgacaatgag
atgaacaacctccagatagctgtgggcaggatgcaaaggggaatcgactttgttaaaagg
aagatccgtgaattcattgagaaggccttcgtgagaaagcagaaggctttggatgaaatc
aaaccccttgaagatctgaacaacaagaaagacagctgtatctccaaccacacgaccata
gaaataggcaaagacctcaattacctcaaagatggaaacgggacgaccagtggcataggc
agcagcgtggagaagtatgtggtagatgagagtgattacatgtcattcataaacaacccc
agtctcactgtgactgtgcccattgccgtcggagagtctgactttgaaaatttaaatacg
gaagaattcagcagcgaatcagatatggaggaaagcaaggagaaattgaacgcaactagt
tcatccgaaggcagtacagtggatataggtgctccggcagagggagagcagccggaagca
gaaccagaagaatctcttgagccagaagcctgcttcacggaagactgtgtgagaaagttc
aagtgttgtcagataagcatagaagaaggcaaaggcaagctctggtggaacttgaggaaa
acgtgctacaagatcgtggagcacaactggttcgaaaccttcatcgtcttcatgattctg
ctcagcagcggtgctctggcctttgaagacatatatatcgagcagcgaaagaccatcaag
accatgctggaatatgctgacaaggtcttcacctacatcttcatcctggagatgcttctc
aagtgggtggcctatggcttccagatgtatttcaccaatgcctggtgctggctggatttc
ctgattgttgatgtctcattggttagcttaactgcaaatgccttgggctattcagaactc
ggtgccatcaaatccctcagaacactaagagctctcaggccactcagagccttatctcgg
tttgaaggaatgagggttgttgtaaatgctcttctgggtgccatcccatccataatgaac
gtgcttctggtctgcctgatcttttggctaatattcagcatcatgggagtgaatctcttt
gctggcaagttctatcactgcatcaactacaccactggggacatgttcgacgtgagtgtg
gtcaacaacttcagtgagtgccaagctctcatagagagcaaccagacagccaggtggaag
aacgtgaaagtcaacttcgataacgtgggacttggctatctttctctgcttcaagtggcc
acatttaaaggatggatggacatcatgtatgcagctgttgactcaagaaatgtagagttg
caacccaaatatgaagacaatctgtacatgtacctttactttgtcatcttcattattttc
ggctcattcttcacactgaatcttttcattggcgtcatcatagataacttcaaccaacag
aaaaagaagtttggaggtcaggacatcttcatgacagaagaacagaagaagtattacaat
gcgatgaagaagctgggatccaagaaaccgcagaagcccatccctagacctgctaacaaa
tttcaagggatggtctttgactttgtaaccaaacaagtctttgacatcagcatcatgatc
ctcatctgcctcaacatggtcaccatgatggtggagactgacgaccagagtcaggagatg
accaacatcctctactggatcaacctggtgttcattgtgctgttcacgggcgagtgcgtg
ctgaagctcatctccctccgccattactacttcaccattgggtggaatatttttgatttt
gtggtggtcattctctccatcgtaggaatgtttctggccgagctgatagagaagtacttt
gtgtcccctaccctgttccgagtcatccgcctggccaggatcggccgaatcctacgtctg
atcaaaggcgccaagggcatccgcacgctgctctttgctctgatgatgtcccttcccgcg
ctgttcaacatcggcctcctgcttttcctggtcatgttcatctacgccatctttgggatg
tccaactttgcctacgttaagagggaagttgggattgatgatatgttcaattttgagacc
tttggcaacagcatgatctgcttattccaaatcaccacctcggcgggctgggacggactg
ctggcacctatattaaatagcgggcctccagactgtgaccctgaaaaagatcaccctgga
agctcggtaaagggggattgtgggaacccatctgtggggatcttcttttttgtcagctac
atcatcatatccttcctggttgtggtgaacatgtacatcgctgtcatcctggagaacttc
agcgttgccacagaagaaagtgcagagcccctgagtgaagacgactttgagatgttctat
gaggtctgggagaagttcgaccccgatgccactcagttcatagagttctgcaagctctcc
gactttgcggctgctctggatcctccccttctcatcgcaaagccaaacaaagtccagctc
atcgccatggatctgcccatggtgagcggagaccgcatccactgcctggacatcttattt
gcttttacaaagcgtgtcttgggggagagtggagagatggatgcccttcgagtccagatg
gaagagcggttcatggcttccaacccctccaaagtctcctatgaaccgatcaccaccact
ctgaaacggaaacaagaggaggtctctgctatcgtcatccagagagcgtacaggcgctac
ctcctgaaacagaaagttaagaaagtgtcatctatatataaaaaagacaagggcaaagaa
ggtgaaggaacgccgatcaaagaagacatcgtcattgataaactaaatgagaattcgact
ccggagaaaactgatgtgacgccttccaccacttccccaccttcctatgacagcgtgacc
aaacccgaaaaggagaaatttgaaaaggacaaatcggaaaaggaggacaaagggaaagat
atcagggaaagtaagaagtaa
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