Chionomys nivalis (European snow vole): 130865935
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Entry
130865935 CDS
T11437
Symbol
Trpc4
Name
(RefSeq) short transient receptor potential channel 4 isoform X1
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
cnl Chionomys nivalis (European snow vole)
Pathway
cnl04360
Axon guidance
cnl04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
130865935 (Trpc4)
09158 Development and regeneration
04360 Axon guidance
130865935 (Trpc4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cnl04040
]
130865935 (Trpc4)
Ion channels [BR:
cnl04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
130865935 (Trpc4)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
130865935
NCBI-ProteinID:
XP_057613081
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Position
24:complement(22367191..22529528)
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AA seq
973 aa
AA seq
DB search
MAQFYYKRNVNAPYRDRIPLRIVRAESELSPSEKAYLNAVEKGDYASVKKSLEEAEIYFK
ININCIDPLGRTALLIAIENENLELIELLLSFNVYVGDALLHAIRKEVVGAVELLLNHKK
PSGEKQVPPILLDKQFSEFTPDITPIILAAHTNNYEIIKLLVQKGVSVPRPHEVRCNCVE
CVSSSDVDSLRHSRSRLNIYKALASPSLIALSSEDPFLTAFQLSWELQELSKVENEFKSE
YEELSRQCKQFAKDLLDQTRSSRELEIILNYRDDNSLIEEQSGNDLARLKLAIKYRQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAVKMVTCFIIGLLFPVFSVCYLIAPKSPLGLFIR
KPFIKFICHTASYLTFLFLLLLASQHIDRSDLNRQGPPPTIVEWMILPWVLGFIWGEIKQ
MWDGGLQDYIHDWWNLMDFVMNSLYLATISLKIVAFVKYSALNPRDSWDMWHPTLVAEAL
FAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFY
YEETKGLNCKGIRCEKQNNAFSTLFETLQSLFWSIFGLINLYVTNVNAQHEFTEFVGATM
FGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFEEGGTLPTPFNVI
PSPKSLWYLVKWIWTHLCKKKMRRKPESFGTIGRRAADNLRRHHQYQEVMRNLVKRYVAA
MIREAKTEEGLTEENVKELKQDISSFRFEVLGLLRGSKLSTIPSGTTASSADADEKSCSE
GNSKDKRKNLSLFDLTTLIHPRSAAIASERHTISNGSALVVQEPPREKQRKVNFVADIKN
FGLFHRRSKQNAAEQNANQIFSVSEEITRQQAAGPLERNIQLESQGLASRGDFSIPGLNE
QCVLVDHRERNTDTLGLQVGKRVCSFKSEKVVVEDTVPIIPKEKHAHEEDSSIDYDLSPT
DTAALEDYVTTRL
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggctcaattctattacaaaagaaatgtcaatgccccctacagagaccgcatccctctg
aggattgtcagagcagagtcggaactctcaccgtctgaaaaagcctacttgaatgcagtg
gagaagggggactatgcgagtgtcaagaagtctcttgaggaagctgagatttactttaag
atcaacatcaactgcatcgacccccttgggaggactgctcttctcatcgccattgagaac
gagaacctggagctcattgaactgttgctgagtttcaacgtctacgttggcgatgcgctg
cttcatgctatccggaaagaggtggtgggagccgtggagctgctgctgaaccacaaaaag
ccaagtggagagaagcaggtgcctcccattctcctggataagcagttctcggaattcact
ccagacatcacacctatcatcttggccgcacatacaaataattatgagataatcaaactt
ttggtccagaaaggtgtctcggtgccgagaccccacgaggtccgctgtaactgtgtcgag
tgtgtctccagctcggacgtggacagcctcaggcactcccggtccaggctcaacatctac
aaggcgttggccagtccctcgctcatcgccctgtcaagcgaagacccttttctcactgcc
tttcagctaagctgggagctgcaggaactgagcaaggtggagaatgaattcaagtcggaa
tatgaggagctgtcgagacaatgcaaacaatttgctaaggacctcctagatcagacacgg
agttccagagagctggagatcattcttaattaccgcgatgacaatagtctgatcgaagaa
cagagtggcaatgatcttgcgaggctaaaattagccattaagtaccgtcaaaaagagttc
gttgcccagcccaactgccagcagctgctcgcctcccgctggtacgacgagttccccggc
tggaggagaagacactgggccgtgaagatggtgacgtgtttcataataggactgcttttc
cccgtcttctccgtgtgctacctgatagctcctaaaagcccacttggactgttcatcaga
aagccttttatcaagtttatctgccacactgcctcctatttgacctttttgttcctgctg
ctgctggcctctcagcacatcgacaggtcagacttgaacagacaaggtccaccaccaacc
atcgtggagtggatgatattaccgtgggtcctgggttttatttggggagagattaagcag
atgtgggacggcggcctgcaggattacattcacgactggtggaatctcatggactttgtg
atgaactccttgtatctggccacaatctccctgaagatcgttgcgtttgtgaagtacagt
gctctgaacccacgggactcatgggacatgtggcaccccaccctggtggcagaggctcta
tttgctattgcaaacatcttcagttccctgcggctgatctcattgttcactgccaattcg
cacctgggacctctgcagatatcgctgggacggatgcttctggacatcctaaaattcctc
ttcatctactgcctcgtgctgctcgcctttgcaaatggcctaaatcagctgtacttctac
tatgaagaaacaaaggggttaaactgcaaaggcatccggtgtgagaagcagaacaatgcc
ttttccacgttatttgaaactctacagtccctgttttggtcaatattcggactcatcaat
ttgtatgttactaatgtcaatgcccagcatgagttcactgagtttgttggggccaccatg
tttgggacatacaatgtcatctctctggttgtcctactgaacatgttaattgctatgatg
aataattcttatcaactaattgccgaccatgcagacatagaatggaaatttgctcgaacg
aagctttggatgagctactttgaagaaggcggcaccctgcctacgcctttcaatgtcatc
ccaagccccaaatccctgtggtacctggtcaagtggatctggacgcacctgtgtaagaaa
aagatgagaaggaagccagaaagcttcgggacaatcgggcggcgggctgctgacaacctg
aggagacaccatcaatatcaagaggtcatgaggaatctggtgaagcggtatgtggcagcc
atgatcagagaggcaaaaaccgaagagggcctgacagaggagaacgtcaaggaactaaag
caagacatttctagcttccgctttgaagttctgggattgctccgaggaagcaagctctcc
acaataccgtcaggcaccacggcgagttcagcagacgccgacgaaaagagctgcagtgaa
ggtaatagcaaggacaagagaaagaatctcagcctctttgatttaaccactctgatccac
ccgaggtcagcagccattgcctccgagagacataccataagcaatggttccgctctggtg
gtgcaggagccgcccagggagaagcagagaaaagtgaattttgtggctgatatcaaaaac
ttcgggttgtttcatagacggtcaaaacaaaatgctgctgagcaaaacgccaaccaaatc
ttctctgtttcagaagaaattactcgtcaacaggcggcaggaccacttgagagaaatatc
caactggaatcccaaggattagcttcacggggtgacttcagcattcctgggctcaatgaa
cagtgtgtactagtagaccatagagaaaggaatacggacactttgggtttacaggtaggc
aagagagtgtgctccttcaagtcagagaaggtggtggtggaagacactgtccctatcata
ccgaaggagaagcatgcccacgaggaggactcgagcatagactatgacttaagccccacg
gacacagcagccctcgaagattacgtgaccacgagattatga
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