Chionomys nivalis (European snow vole): 130866817
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Entry
130866817 CDS
T11437
Symbol
Sf3b1
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
KO
K12828
splicing factor 3B subunit 1
Organism
cnl Chionomys nivalis (European snow vole)
Pathway
cnl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cnl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130866817 (Sf3b1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cnl03041
]
130866817 (Sf3b1)
03036 Chromosome and associated proteins [BR:
cnl03036
]
130866817 (Sf3b1)
Spliceosome [BR:
cnl03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
130866817 (Sf3b1)
Complex B
130866817 (Sf3b1)
Complex C
U2 SnRNP specific factors
130866817 (Sf3b1)
Chromosome and associated proteins [BR:
cnl03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
130866817 (Sf3b1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
130866817
NCBI-ProteinID:
XP_057614425
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Position
26:3861421..3906345
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AA seq
1304 aa
AA seq
DB search
MAKIAKTHEDIEAQIREIQGKKAALDEAQGVGLDSTGYYDQEIYGGSDSRFAGYVTSIAA
TELEDDDDDYSSSTSLLGQKKPGYHAPVALLNDIPQSTEQYDPFAEHRPPKIADREDEYK
KHRRTMIISPERLDPFADGGKTPDPKMNARTYMDVMREQHLTKEEREIRQQLAEKAKAGE
LKVVNGAAASQPPSKRKRRWDQTADQTPGATPKKLSSWDQAETPGHTPSLRWDETPGRAK
GSETPGATPGSKIWDPTPSHTPAGAATPGRGDTPGHATPGHGGATSSARKNRWDETPKTE
RDTPGHGSGWAETPRTDRGGDSIGETPTPGASKRKSRWDETPASQMGGSTPVLTPGKTPI
GTPAMNMATPTPGHIMSMTPEQLQAWRWEREIDERNRPLSDEELDAMFPEGYKVLPPPAG
YVPIRTPARKLTATPTPLGGMTGFHMQTEDRTMKSVSDQPSGNLPFLKPDDIQYFDKLLV
DVDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLM
SPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNL
AKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAVCKSKKSWQA
RHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAIAALAEAATPYG
IESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSP
DEEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALDRRNYRQLVDTTVEL
ANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQLIDGILYAF
QEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQAADLISRTAV
VMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIKDLLPRL
TPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAIRRATVNT
FGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPE
LNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVVQHMSLGVY
GFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHPARK
VRDVYWKIYNSIYIGSQDALIAHYPRIYNDDKNTYIRYELDYIL
NT seq
3915 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcgccaagactcacgaagatattgaagcacagattcgagaaattcaaggc
aagaaggcagctcttgatgaagcccaaggagtgggccttgattccacaggttattatgac
caagaaatttatggcggaagtgatagcagatttgctggatacgtgacatcaattgctgca
actgaactcgaagatgatgacgatgactactcatcatcgaccagtctgctcggtcagaag
aagcctgggtaccacgcccccgtggcactgcttaacgacataccgcagtcgacagagcag
tacgatccatttgctgagcatcgtcccccgaagattgcagaccgggaagatgagtacaaa
aaacacaggcggaccatgataatttccccagagcgtcttgatccttttgcagacggaggg
aagacccctgaccctaaaatgaatgccagaacttacatggatgttatgcgggaacagcat
ttgactaaggaagagagagaaattaggcaacaactagcagaaaaagctaaagctggggag
cttaaagtcgtgaatggagcagcagcatcccagcccccctcaaaacgaaaacggcgctgg
gatcaaactgctgaccagactcctggtgccactcccaaaaagctgtcaagttgggatcag
gcagagacccctggacataccccttctttaagatgggatgagacaccaggtcgtgcaaaa
ggaagtgaaactcctggagcaaccccaggttcaaaaatatgggaccctacacctagtcac
acacctgcgggagctgctactcctggacgcggcgataccccaggccatgcaaccccgggc
cacggtggtgcaacttccagtgctcgtaagaacagatgggatgagacccccaaaacagaa
agagatactcctgggcatggaagtggatgggctgagacgcctcgaacagatcgaggtgga
gactctatcggtgagacaccaactcctggagcaagcaaaagaaagtctcgttgggatgaa
acgccagctagtcagatgggtggaagcacccctgttctgactccaggaaagacaccgatt
ggaacgccagccatgaacatggctacccccacgccaggtcacataatgagcatgactcct
gagcagcttcaggcatggcggtgggagagagagattgatgagcggaaccgcccactttct
gatgaagaattagatgctatgtttccagaaggatacaaggtccttccccctccagccggt
tatgtccctatccggaccccagctcggaaactgaccgcaacccccacgcctttgggcggc
atgactgggttccacatgcagacggaagatagaactatgaagagtgtcagtgaccagccg
tccgggaaccttccgtttctgaaacccgatgacatccagtactttgataagctgttggtt
gatgttgacgaatcaacacttagtccagaggagcaaaaggagagaaaaataatgaagttg
cttttaaaaattaagaatggtacacctccaatgagaaaggctgccttacgtcagattact
gataaagctcgagaatttggggctggacctttgtttaaccagattcttcctttgttgatg
tctcctacacttgaggatcaagagcgtcatttacttgtgaaagttattgatagaatattg
tataaactggatgacttagtgcggccgtatgtgcacaagattcttgtggttattgaacca
ctgctgattgatgaagattactatgctagagtggaaggcagagaaattatttctaatttg
gcaaaggccgctgggctggctaccatgatctccaccatgagacccgacatagataacatg
gatgagtatgtccgaaacacaacggctagggcttttgctgttgtagcctctgccctgggc
attccttctctattgcccttcttaaaagctgtgtgcaaaagcaagaagtcttggcaagcg
aggcacactggcattaagatcgtacagcagatagctattcttatgggctgcgctatcttg
ccacatctcagaagcttagttgaaatcattgaacatgggcttgtggatgagcagcagaaa
gtccggaccatcagtgctttggccattgctgctttggctgaagcagcaactccttatggt
atcgaatcttttgattctgtgcttaaacctctatggaagggcatccgccaacacagagga
aagggtttggccgctttcttaaaggctatcgggtatctcattcctcttatggacgcagag
tacgccaactactatactagggaggtgatgttgatccttattcgagagttccagtctccg
gacgaagagatgaagaaaattgtattgaaggtggtgaagcagtgctgtgggacggacggt
gtggaagcgaactacattaagacagagatcctccctcctttcttcaaacacttctggcag
cacagaatggctttggatagaagaaattaccgacagttagttgatactactgtggagttg
gcaaacaaagtaggagcagcagaaattatatctaggattgtggatgatctgaaagatgaa
gctgaacagtacaggaaaatggtgatggaaacaattgagaaaattatgggcaacctgggt
gcagcagatattgatcacaaacttgaagagcagctgattgatggcattctctatgcgttc
caggaacagaccacagaggattcagtaatgttgaacggctttggcacagtagttaatgct
cttggcaaacgagtcaaaccgtacttgcctcagatctgtggtactgttttgtggcgttta
aataacaaatcagcaaaagttaggcaacaggcagctgacttgatttcccgcactgctgtt
gtaatgaagacttgtcaagaggaaaagctgatggggcacttgggtgtggtgctgtatgaa
tatttgggtgaagaataccctgaagtattggggagcattctcggagcgctgaaggctatt
gttaacgttataggtatgcacaagatgacaccaccaattaaagatctgctgcctagactc
acccccatcttaaagaacaggcatgaaaaagtacaggagaattgcatcgatctcgttgga
cgcattgctgacaggggagctgaatatgtatctgcaagagagtggatgaggatttgcttt
gaacttttagagctcctaaaagcacacaaaaaggccattcgaagagctactgtcaacact
tttgggtatattgcgaaggccatcggccctcatgacgtattggctacgcttttaaacaac
ctcaaagttcaggaaaggcagaacagagtttgcaccactgtagccattgccattgttgct
gagacatgctcccccttcacagtgctccctgccttaatgaatgagtacagagttcctgaa
cttaacgttcaaaacggagtgctgaaatccctgtccttcctgtttgagtacatcggcgaa
atggggaaagactacatctacgcggtaacgcctttactcgaggatgcgttaatggacagg
gaccttgtgcacaggcagacagctagcgcagtggtacagcacatgtcacttggtgtctat
ggctttggctgtgaagactctctgaaccacttactgaactatgtatggccgaatgtgttt
gagacatcgccccacgtaatccaggccgtcatgggcgctctggagggcctgagagttgct
attggaccctgcagaatgttgcagtactgcttacagggtctgtttcacccagctcggaaa
gtcagagatgtgtactggaagatttacaactctatctacatcggctcccaggacgcgctc
atagcacattacccgaggatctacaacgacgacaagaacacctacatccgttacgaactt
gactatatcttgtaa
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