Clostridium novyi: NT01CX_1773
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Entry
NT01CX_1773 CDS
T00431
Name
(GenBank) DNA mismatch repair MutS2 family protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
cno
Clostridium novyi
Pathway
cno03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
NT01CX_1773
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cno03400
]
NT01CX_1773
DNA repair and recombination proteins [BR:
cno03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
NT01CX_1773
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
AAA_22
Borrelia_P83
Motif
Other DBs
NCBI-ProteinID:
ABK61971
UniProt:
A0PZP4
LinkDB
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Position
977126..979483
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AA seq
785 aa
AA seq
DB search
MNEKSLRVLEFNKIKDELKKYTQTSAAKDLIERLHPYESAYEVREHLMETEEAFKISIKK
GDAPFSGLYDIREAISKAQRRFTLFPSELLRVANLLRASRRFKGYVKSDDLSEKYEVLES
ITEGLVPLNGLEEEISKCIIGEEEISDRASTTLFNIRRSLKDKTSSIKARVNSLIRTYSS
HLQENIYTVRGERYVLPVKVEHKGAVPGLVHDQSASGATLFIEPMSLVDLNNEIKELRLK
EKAEIDRILAFLSGKVYENVDVIKVDADILWELDFIFAKAKYAQKLGAIMPIISEDGHFN
IINAKHPLIDPKKVVENNIYLRDGITSVVITGPNTGGKTVTLKTVGLLHIMAMSGLMITA
SQGSTISFFKEVFADIGDEQSIEQSLSTFSSHMTNIVNIIDSADENSLVLFDELGAGTDP
TEGAALAVSILENLRKRKTKVIATTHYSELKAYALKVDNVENASVEFDVETLRPTYRLLI
GVPGKSNAFEISKRLGLPDYIIEDAREGISEETLKFEDLIQSLQHKNIKAQEHARKAESA
KEEAVKLKEKYESKLDKFQDIREKAILNAQKEAKEIIKEAKEEADKILKDIRELERMGYS
SDVRKLLEENRKKLKDKLEKTESKLNQPKEVGEAVTNVSEGDELYLPKFETKVMVLTNPD
NKGDVQVQAGIMKIKVNIKDLRKTKETKIEKRQRKKKQMSLNLKSVATSVDLRGMDSEEA
TYTADKYLDDACMSGLSEVTIIHGKGTGVLRTAINDMLKRHPHVKSYRLGNYGEGGNGVT
VVELK
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaaaatctttaagggttttagaatttaataaaataaaagatgaattaaaaaag
tatacccaaacttcagcggctaaggatttaattgaaaggcttcacccttatgaaagtgca
tatgaggttagggaacacttaatggaaacagaagaagcttttaaaatatccataaaaaaa
ggggatgcaccttttagtggactatatgatataagggaagcaatatcaaaagctcaaaga
agatttacactttttccatcagagcttcttagggttgctaatttacttagagcctcaaga
agatttaagggctatgtgaaaagtgatgatttaagtgaaaagtatgaagtgcttgaaagt
attacagaggggcttgtacctttaaatggactagaagaagagatttctaaatgtataatt
ggagaagaagaaatctcagatagagcaagtactactctttttaatataagaagatcccta
aaggataaaacaagttcaataaaagctagagttaattctcttattagaacatattcttct
catcttcaagaaaatatatatacagtaagaggagagagatatgtacttccagtaaaagta
gaacataaaggagcagtaccaggacttgtacatgaccaaagtgcatcaggagcaacactt
tttatagaacctatgagcttagttgatttaaataatgaaataaaggaattaagacttaaa
gaaaaagctgaaatagatagaatacttgcttttctttcaggaaaagtatatgaaaatgta
gatgttattaaggtagatgcggatattctttgggaacttgattttatatttgcaaaggct
aagtatgctcaaaagttaggagcaataatgcctataataagtgaagacggtcattttaat
ataataaatgcaaaacatccacttatagatcctaaaaaagtagtggaaaacaatatctat
cttagagatggaataacatctgttgtaattacagggcctaatacaggtggtaaaacagtt
acactaaagactgtaggattacttcacataatggcaatgagtgggcttatgataacagca
tctcaaggatcaactataagtttctttaaagaagtttttgcagatattggagatgaacaa
agtatagagcaaagtttatcaacattctcatctcacatgacaaatatagtaaacataata
gatagtgcagatgaaaattcattagtattgtttgatgaacttggtgctggaacagatcct
acagaaggagctgcacttgcagtttcaattcttgaaaatttgagaaaaagaaaaacaaag
gtaatagctacaactcactatagtgaacttaaagcctatgcattaaaggttgataatgta
gaaaatgcatctgtagaatttgatgttgaaacattaagacctacatatagactactaata
ggagtaccaggaaaatcaaatgcctttgaaatatctaaaagactcggacttccagattat
attatagaagatgcaagagaaggaatttcagaggaaactcttaaatttgaagatttaata
caatctcttcaacataaaaacattaaagcacaggaacatgcaagaaaagcagaaagtgca
aaagaagaagctgtaaaacttaaagaaaaatatgaaagcaaattagataaattccaagat
ataagagaaaaagcaattttaaatgcccaaaaggaagctaaagaaatcataaaagaagct
aaagaggaagcagataaaatactaaaagacataagagaacttgagagaatgggatattct
tcagatgttcgtaaacttttagaagagaatagaaagaaattaaaagacaaattagaaaag
acagaatcaaaattaaatcagccaaaagaagttggtgaagctgtaactaatgtatcagaa
ggagatgaattatatcttcctaaatttgagacaaaagttatggtacttacaaatcctgat
aataagggagatgttcaagtacaggctggaattatgaaaataaaagtaaatattaaagat
ctaagaaaaactaaagaaactaagatagaaaaaagacaaagaaagaaaaaacaaatgagt
ttaaacttaaaatcagtagcaacatctgttgatttaagaggaatggattcagaagaagca
acttatactgctgataaatatctagatgatgcgtgtatgagtggactttctgaagttact
ataatacatggtaaaggtacaggggtacttagaactgccataaatgatatgttaaaaaga
catcctcatgtaaaatcttatagacttggtaactatggagaaggcggaaatggagttact
gtagtagaacttaaataa
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