Contarinia nasturtii (swede midge): 116341566 Help Entry 116341566         CDS       T08003                                  Name (RefSeq) protein SMG8   KO K18734   protein SMG8 Organism cns  Contarinia nasturtii (swede midge) Brite KEGG Orthology (KO) [BR:cns00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cns03019]     116341566 Messenger RNA biogenesis [BR:cns03019]  Eukaryotic type   mRNA surveillance and transport factors    Surveillance factors     Other surveillance factors      116341566 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Smg8_Smg9 Piezo_TM1-24 Motif Other DBs NCBI-GeneID:  116341566 NCBI-ProteinID:  XP_031624571 LinkDB All DBs Position Unknown AA seq 921 aa AA seqDB search MSRIFTGVFPDIPSELSSRLFHDDQLVVIGVIGKSNDAKCNKMIGFDMVKFAPENTSIQN GQISFYFNESEGKSLYIHFQTTFDMVVMEQLFMERLTKMTREQTTQEQTTQEKRSSRRRN SSIHSLHTLVRTKFAQMLLFAIQICHIIVLVEPNNVFDTGYLSIFKALKVIREQYVLKFL PKFLKNSSAGAQIGKEGRLCSPRFLFYFEKTLNEYSNLEALQRFEFEIEDSIYKMLRNEF VITNNSLNSLFSIPRNKRFVCINTNRNLHANPITKSVNELALCINKEKYAPHSDGEDNDS DDDIRPFKGFAKPLSNYKMGNSKNIWSEKKNRLIELISEHVEEALKSGFDDSVAKYKGKG HFVIPSGKSWYEMFKLLHKIFVENPDNSSFEPNDSDYKSYLENFTRIVDIDDRFYTECCE YGLERAREHYKEMLPSFYSKNYHEQKVLQSISMLKKFGRGPNLSASEKKLTDVCNEFWLN GRQQCEVLSLRGNPCAMAKHEDDGHISTEVIISTCNCGRTQGRRNDPFRLRQANYEFYQI MMNSCTMCPKLETIPFAVFEPSSNDYRAAELEKTIVDEKTMVEEDDDEYQVLTMPSQLAN PLSIGSGLTFTDDENNDSNNPISNNQSTENISSDHEVILEPSDDEINEIVIQVGGEENEE NLEKGIYRQPSTTEYLSGMVHTMSPIGLLPQFSSWSLVCVGHSSVYSHNSGIPEHAQSGF LSGANFLLPWDVQVRLENAASWARTLDKARHRRKPQPKDDSDGQVFMLKIFVGCEYECAR GHRFFMSSPDTILRGGSGIVKDGGSKIVFNDMPLYFACPCRNAKPSVAQLMRVHVVTPKA PVNIILEPKIRTGDKNGYTFTTGLTDPPKLSQSAYWVLRLPYVYEGNDGPIMPPADVTAA NCMNWGYLSAGMYGIVETKTK NT seq 2766 nt NT seq  +upstreamnt  +downstreamnt atgagtcgaatattcactggtgtatttcccgacattccatcggaattaagttcgcggttg tttcatgacgaccagttagttgtaattggcgtgattggaaagtcaaacgatgccaaatgt aataaaatgattggatttgatatggtgaaatttgcaccggaaaatacaagcatacaaaat ggacagattagtttctatttcaatgaatcggagggcaagagtttgtatattcactttcaa accacctttgatatggtggtcatggagcaactttttatggaacgactgaccaagatgact agagaacaaaccacacaagagcaaacgacacaagagaaacgcagtagccggcgacgaaac agttctattcattcattacatacgcttgttcgcaccaaatttgcacaaatgctactgttt gccattcaaatttgtcatatcattgtactggttgaaccaaacaatgtatttgacacgggg tatttgagcattttcaaagcattgaaggttattagagagcagtacgttttgaagtttctt ccgaagtttttgaaaaattccagtgctggtgctcaaattggcaaagaaggacgattatgt tcaccgcgatttttattttattttgagaaaacactcaatgaatacagcaatctggaagca ttgcaacgatttgagttcgaaattgaagattcgatttacaaaatgttgcgaaatgaattt gtaatcacaaacaatagtttaaattcactattttcaattccgcgaaacaaacgattcgtt tgcataaatacaaatcgaaatttacatgcaaatccaatcacaaaatcggtcaacgaacta gcgctgtgtatcaataaagaaaagtatgccccacatagtgatggagaagacaacgatagc gatgatgatataagaccgttcaaaggttttgcaaagccattgagcaactacaaaatgggc aatagcaagaacatttggtcagaaaaaaagaatcgtctaattgaactaatttcagagcac gtagaagaggctctgaagtccggattcgatgacagcgttgccaagtataagggaaaagga cattttgtgattccgtctggcaagtcatggtacgagatgttcaaattattacataaaatt ttcgtcgaaaatccggataactccagttttgaaccaaatgattcggactataaatcgtac ttggagaatttcacccggatcgttgacattgatgacagattctacacggagtgctgtgaa tatggtttggaacgtgcaagagaacattacaaagagatgttgccatcattttacagcaag aattatcatgagcaaaaggttttgcagagcatttccatgctgaaaaaattcggacgcggc ccaaatctgtcggcgtctgagaagaaactgacagatgtttgcaatgaattttggctgaat ggccgccagcagtgcgaagtattgagtttgcgtggaaatccatgtgcgatggcaaaacat gaagatgatggtcatattagtaccgaagtgatcatatcgacttgtaattgtggcagaaca cagggaagacggaatgatccatttagattaagacaagcaaactatgaattctatcaaatt atgatgaacagttgtacaatgtgcccgaaattggaaaccattccatttgctgtatttgaa ccatcgtcaaacgattatcgagctgcagagctagagaaaacaattgtcgatgaaaaaaca atggtagaagaagacgatgacgaatatcaagtgcttacgatgccatctcagttggcaaac ccattgagcattgggtcgggacttacatttaccgatgatgaaaataacgattcaaacaat ccaatcagtaataatcaatcaacggaaaatatttcatccgaccatgaggtaatactggag ccaagcgatgatgaaattaatgaaattgtcattcaagtgggcggcgaagagaacgaagaa aatttagagaagggcatctatcgacaaccatcaacaacagaatatttatcaggcatggtt catacaatgagtccaattggtttgttgccacaattctcaagctggtcattggtttgcgtt ggtcacagttccgtttattcacacaattcaggaattccggagcatgctcaaagtggattt ttatctggtgcaaattttttgttgccctgggacgtgcaagtacgtttggaaaatgcagca tcatgggctcgaacactagataaagcacggcatcgtcgaaagccacaacccaaagacgat tcagatggtcaagtgtttatgttgaaaattttcgtcggctgtgagtacgaatgtgcacgg ggtcaccgatttttcatgagtagtcccgatactattctaagaggtggatcaggtattgtt aaagacggtggcagtaaaattgtgtttaatgacatgccgctgtacttcgcctgtccctgc agaaatgccaaaccaagtgtggctcaattgatgcgagtacatgttgttacgcccaaagct ccagtcaacatcatattagaaccgaagattcgtaccggagataagaatggctatacattt accacgggattgacagatccaccaaaactgtcacaaagtgcatattgggtgttacgttta ccgtatgtgtacgagggaaacgatggaccaattatgccaccagctgatgtaaccgcagcg aattgcatgaattggggctatctatcggccggaatgtatggaattgttgaaacaaaaact aaatga

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