Contarinia nasturtii (swede midge): 116342480
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Entry
116342480 CDS
T08003
Name
(RefSeq) RNA-binding protein cabeza isoform X1
KO
K13098
RNA-binding protein FUS
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns03015
mRNA surveillance pathway
cns03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116342480
09122 Translation
03015 mRNA surveillance pathway
116342480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cns03041
]
116342480
Spliceosome [BR:
cns03041
]
Complex A
Other components
Complex A specific factors
116342480
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
zf-RanBP
Motif
Other DBs
NCBI-GeneID:
116342480
NCBI-ProteinID:
XP_031625974
LinkDB
All DBs
Position
Unknown
AA seq
383 aa
AA seq
DB search
MGDYYGYGNGGSGGGSSGGAPTPNFSVPPPNFSKGPNYQNQNSQQNSYGPPPPQGNWGPN
QSRNDDSSGYGSGNYNNQGRNNQGNRGGGGGGAGNFGNSQRNESGYNDRKNNFSGGSVNK
SGYNKAGGYDSSNDNMIIQEDTIFVSGMSSQTTEEDIACHFGAIGIIKKDKKTMKPKIWL
YRNKETGESKGEATITYDDSNAAKSAISWFDNKDFNGANIHVSLAQRQNNWQKGGNFRSN
PRGGGGAGGPPGGNRDGGSGGNRGGFNRDHSASGARNDDRRSQGISGGGGGGGGGFGRNQ
RDGDWTCSSCNNTNFAWRNECNRCKEPKSGAGGGMTGGGSGNSSFRQGGAGGPPRGGNSN
FNRRDQGPMRGAGDRGNDRNRPY
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgggcgattattatggctatggaaacggcggctcaggtggcggctcaagcggtggtgca
ccaacaccaaacttctctgttccaccaccaaactttagcaaaggaccgaattaccaaaac
caaaattcacagcaaaacagctatggaccaccaccaccgcaaggtaattggggtccaaat
caatctcgcaacgatgatagctctggctacggaagcggaaactacaataatcaagggcgc
aataatcaaggaaatcgtggtggtggtggtggcggcgctggtaattttggaaacagccaa
cgtaatgagagcggctacaacgatcgtaaaaataatttcagcggcggcagtgtcaacaag
agtggttataataaagcaggtggatatgatagcagcaacgataacatgatcattcaggaa
gacacaatttttgtcagtggaatgagttcacaaacaactgaagaagacatcgcatgtcac
tttggtgcaatcggtattattaagaaagataagaagacaatgaagcccaaaatttggctg
tatcgtaacaaagagaccggtgaatcgaaaggagaagccacaattacttacgatgactca
aatgccgccaaatcagccatatcgtggtttgacaataaagatttcaatggagccaacatt
cacgtctcattggcacagcgtcaaaataactggcaaaagggcggcaatttccgtagtaat
ccgcgcggtggtggtggtgctggtggaccaccaggtggaaacagggatggcggctcaggt
ggaaatcgtggtggtttcaatcgagaccatagtgctagtggcgctagaaatgatgaccga
cgcagccaaggcatttcaggtggtggtggtggtggtggtggcggctttggccgaaatcaa
cgcgatggtgattggacgtgtagcagttgtaacaacacgaattttgcctggagaaatgag
tgtaatcggtgtaaagaaccaaagagtggtgcaggtggtggcatgaccggaggaggtagt
ggtaacagcagcttccgtcaaggtggtgcaggtggaccaccacgtgggggaaattcaaat
ttcaacagacgagatcaaggacctatgcgcggtgctggtgaccgtggtaacgaccgtaac
cgcccgtactaa
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