Contarinia nasturtii (swede midge): 116345276
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Entry
116345276 CDS
T08003
Name
(RefSeq) structural maintenance of chromosomes protein 1A
KO
K06636
structural maintenance of chromosome 1
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cns03036
]
116345276
Chromosome and associated proteins [BR:
cns03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
116345276
Meiosis-specific proteins
Cohesin complex and associated proteins
116345276
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_29
FKBP15
DUF7310
ABC_tran
Motif
Other DBs
NCBI-GeneID:
116345276
NCBI-ProteinID:
XP_031630371
LinkDB
All DBs
Position
Unknown
AA seq
1224 aa
AA seq
DB search
MSAFLRYIEVENFKSYKGFVSIGPLKRFTAVIGPNGSGKSNFMDAISFVMGEKTNCLRVK
RLSELIHGAAIGRPVSNRCFVTAKFELPDGTKIDFQRSVIGSSADYKINGKGVQSGTYLE
ELEKLGINVKAKNFLVFQGAVESIAMKNAKERTALFEEISGSGLLKDEYNRLKYEMQQAE
EETQYTYQKKRGVAAERKEAKAEKQEADRYARLKDEVAEKQIQCQLFRLYYIEKDIQRLM
NEIKEKQEELTDVEKKKEQADEILKDKKKEAGKRSRELAELEQKIRVVEAEMSKKHPMFI
KAKEKVAHSQKKLTTAQKNLEQAKKADESHQADIQKLEQELVSVQNTKREFEQKLANESQ
RRGTSVVSEQVHVEEYDRLKQQAEATAAQYVSELESINREQKSDQDLLDNETNKKEQIEG
QLEKCRLEKEEVQKRMEKLFDHIRSSEQALQEQNRIKDELKNDVGSSKERIAELQKELDM
VRDQLGDAKGDKHEDARRKKKQEVVELFKREVPGVYDRMINMCQPTHKRYNVAVTKVLGK
YMEAIIVDTEKTARRCIQILKEQRLEVETFLPLDYLQAKPLKQRLRDIKEPKQVKLVYDV
LKFDPPEIEKAVLFATNNALVCETPEDAMKVAYEIDRSRYDALALDGTFYQKSGIISGGS
HDLARKAKRWDEKHMAQLKSQKEKLAEDLKELVKKSRKGSELATVESQIKGLENRLKYSQ
KDLEASKKAIQNYEKNLKDLENELNAISPLIGTIERRMAQRNQKIEEIKQKMNTVEDRVY
ADFCKKIGVANIRQFEERELVLQQERAKMQADFDQQIDRVTSRLDFERTKDTQVNVQRWE
RVISDEEDAFEKCKQNEEKQRAAIDADKAQIEQLKGEKNEKKKDVDNLEKEVNKARHDVA
TLAKEIHNINYQISSIDTKVETKKNERHNILIQSKMDDIMIPMINGNLNDIDQGGDDQNE
SMVVGSSAALARESLLQIDYSKLPRNVLELNTNEAIKKMNDTLQKELQSKQDTLERIQTP
NLKAMQKLESVSEKILATNEEFENARRKAKKAKAAFEKVKNQRYEKFKACCDHITEEIDG
IYKSLARNEAAQAYLGPDNPEEPYLEGINYNCVAPGKRFQPMSNLSGGEKTIAALALLFA
IHSYQPAPFFVLDEIDAALDNTNIGKVASYIVEKTTNLQTIVISLKEEFYGHSDALVGIT
PDPGDCLISRVYTYDLTLFEDTLT
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcatttctaaggtatattgaagtggaaaacttcaaatcctataagggttttgtt
tcaattggcccattgaaacgatttacagccgtcattggaccaaatggatccggcaaatcg
aatttcatggatgcaatcagttttgtgatgggcgaaaaaacaaattgtttgcgtgtgaag
cggcttagcgaattaattcacggtgctgcaattggacggcccgtttccaatcgatgtttt
gttaccgcaaaattcgaactacccgatggtacaaaaattgacttccaaagatcggtcatc
ggttcatcggccgattataaaattaatggaaagggtgttcaaagcggaacctatttggaa
gaattggaaaaattgggaatcaatgtgaaagcgaaaaattttctggtatttcaaggtgct
gtcgaaagcattgcaatgaaaaatgccaaagaacgaacggcactatttgaagagataagt
ggctcgggtttattgaaagatgaatacaatcgattaaaatatgaaatgcaacaagctgaa
gaggaaacacagtatacataccagaaaaagagaggcgttgccgctgaacgtaaagaagcc
aaggctgaaaagcaagaagctgaccgatatgcacgtctaaaagatgaagttgctgaaaag
caaatccagtgtcaattattccgtttgtattatatcgaaaaagatattcaacgtttgatg
aatgagataaaggagaaacaagaagaactaactgatgttgaaaagaaaaaagaacaagct
gatgaaattttgaaagataagaaaaaagaagcgggtaaacgttcacgtgaattggccgaa
ttggaacaaaaaattcgtgttgttgaagccgaaatgagtaaaaagcatccgatgtttatc
aaggccaaagaaaaggtggcccattcgcagaaaaagttgacaacagcacagaaaaatttg
gaacaagcaaagaaggccgatgagtcgcatcaagctgacattcaaaaattggaacaagaa
ttggtttccgtacaaaatacgaaacgtgaattcgaacaaaaattggccaatgaatctcag
cgtcgtggtacgagcgttgtgtccgaacaggttcatgtcgaagaatatgatcgtcttaag
cagcaggccgaagcaacagccgcccaatacgtgagcgaattggaatcgataaatcgagaa
cagaaatctgatcaagatttgctggacaacgaaacaaataagaaagaacaaatcgaaggc
caattggaaaaatgccgactggaaaaagaagaagttcaaaagcgaatggaaaagttattc
gatcacattcgatcgagtgagcaagcactgcaagagcaaaatcgtatcaaagacgaactg
aaaaacgatgtcggctcatcaaaggaacgtatcgctgaattgcaaaaagaattggatatg
gtacgcgatcagttgggcgatgccaaaggtgacaagcacgaagacgctcgccgcaaaaag
aaacaagaagttgtggaattatttaagcgtgaagttcccggtgtgtacgatcgaatgatt
aatatgtgtcagccaacgcacaaacgctacaatgtggccgttacaaaagttttgggtaaa
tacatggaagccattatcgttgacacagagaaaacagcacggcgttgcatacaaattttg
aaagagcaacgcttagaggttgaaacatttttgccgctagattatttacaagcaaaacca
ttaaaacaacgtttgcgtgacatcaaagagccaaaacaagtgaaattggtgtacgacgta
ctaaaatttgatccaccagaaattgaaaaggccgttttatttgcaacaaataatgcattg
gtctgtgaaacaccagaagatgccatgaaagttgcatacgaaattgatcgcagtcgttat
gacgcactcgcattagacggaacattttatcaaaaatccggtattatttctggtggtagc
cacgatttggcacgcaaagccaaacgatgggatgaaaagcatatggcacaattgaaatcg
caaaaagaaaaattggccgaagatttgaaggaattggtgaaaaaatcccgtaaaggcagt
gaattggcaacggttgagagtcaaattaaaggactcgaaaatcgcttgaaatacagccaa
aaggatttggaagcatcaaagaaagccatccaaaactacgaaaagaaccttaaagatttg
gaaaatgaattgaatgcaatcagcccgttgatcgggacaattgaacgacggatggcacaa
cgaaaccaaaagattgaggaaatcaagcaaaaaatgaacacagtcgaagatcgtgtatat
gctgatttctgtaaaaaaatcggtgtggccaacattcgacaattcgaagaacgtgaattg
gtgttgcaacaagaacgtgccaaaatgcaggctgattttgatcaacaaattgatcgtgtc
acatcacgattggatttcgaacgcacaaaagatactcaagtaaacgttcaacgttgggaa
cgtgttatttccgacgaagaagatgcatttgaaaagtgcaaacaaaatgaagaaaaacaa
cgggccgccatcgatgcggacaaagcacagatcgaacaactcaaaggtgaaaagaatgaa
aaaaagaaagacgttgacaatttggaaaaagaagtgaataaagcgcgtcatgatgtggcc
acattagccaaagaaattcacaatatcaactatcaaatttcatccattgacacaaaagtc
gagacaaagaaaaatgaacgacataacattttgattcaaagcaagatggacgacataatg
attccaatgataaatggtaatttaaatgatatcgatcaaggtggtgatgatcagaatgaa
tcgatggttgttggcagttcggctgcattggcacgtgagagtctacttcaaatcgattat
agtaaactgccgcgaaatgtattggaattgaatactaatgaagcgattaaaaagatgaac
gatacgctgcaaaaagagttgcaatctaagcaagacacattggagcgcattcaaacgcca
aacttgaaggcaatgcaaaaattggagagcgtctctgaaaagattcttgcaacgaatgaa
gagtttgagaatgcacgtcgcaaggcgaagaaagcaaaggctgcatttgaaaaggtaaaa
aatcaacgatatgaaaaattcaaagcgtgttgcgatcacatcacagaagaaattgacggc
atttataaatcgttggctcgaaatgaagctgctcaagcatacttgggaccagacaatcca
gaagaaccatatctggaaggtatcaattataattgtgttgcgcctggcaaacgattccag
cccatgagcaatttgagtggtggtgaaaaaacaattgccgcgttggcacttttgtttgcc
attcatagctatcaaccggcaccatttttcgtactcgatgaaatcgacgcagctttagac
aacacgaacatcggcaaagttgcctcgtatattgtcgaaaagaccacaaatctacaaaca
attgtcatatcacttaaggaagaattctacggccattcggatgcacttgttggtattaca
ccagaccctggcgattgtttgatctcacgggtctatacctatgacttaacactgttcgag
gacacactcacttaa
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