Contarinia nasturtii (swede midge): 116346607
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Entry
116346607 CDS
T08003
Name
(RefSeq) protein crooked neck
KO
K12869
crooked neck
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116346607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cns03041
]
116346607
03036 Chromosome and associated proteins [BR:
cns03036
]
116346607
Spliceosome [BR:
cns03041
]
Complex B
Other components
Prp19-related factors
116346607
Complex C
116346607
Chromosome and associated proteins [BR:
cns03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
116346607
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT
HAT_Syf1_CNRKL1_C
TPR_14
Suf
TPR_CcmH_CycH
TPR_16
TPR_17
TPR_12
Mad3_BUB1_I
SPAN-X
Motif
Other DBs
NCBI-GeneID:
116346607
NCBI-ProteinID:
XP_031632611
LinkDB
All DBs
Position
Unknown
AA seq
684 aa
AA seq
DB search
MERMQKMPKVAKVKNKAPAEVQITAEQLLREAKERDLEILPPPPKQKISDPAELADYQHR
KRKAFEDNLRKNRMVVSNWIKYAQWEESQKEIQRARSIWERAIDNDHRNITIWLKYIEME
MKNKQVNHARNLFDRAVTILPRVNQFWYKYVYMEEMLENLGGARAVFERWLEFLPEEQAW
NTYINFELRYKEIDRARKIYERLVMVHPDIKNWIKFARFEENHGFINGARKIYENAIEFF
GEDHMEEKLFIAFARFEEGQKEHDRVRVIYKYALEHLPKDRTNDLYKAYTIHEKKYGDRS
GIEDVIVSKRKFQYEQEIGDNPTNYDAWFDYLRLIENEGDAETIRETYERAIANVPPSKD
KSLWRRYIYLWINYALYEEIQAQNEERTRQVYKTCLEVIPHKIFTFSKIWLMYAQFEIRC
KNLSNARKALGQAIGICPRDKLYRGYIELEIQLREFDRCRLLYQKFLEFGPENCITWIKF
AELETLLGDFDRARAIFELAINQNRLDMPELLWKAYIDFEVNQSKNELARQLYERLLERT
IHVKVWISYAKFEFTCEENDEYLNISLARRIYERANDALKNSPEKENRVVLLEAWRDFEN
EHGTRDTYEKVMEKLPRRIKKRQKIISDTGTEEGWEEVFDYIFPEDEMARPNLKLLAAAK
NWKKKQTTDQTTQNGNDVENNVNF
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggaaagaatgcaaaaaatgcccaaagtggcaaaggtaaaaaataaagcaccagcagaa
gtacaaattacagcggaacaattattacgtgaagcgaaagaacgtgatttggaaattctg
ccaccgccaccgaaacagaaaatttccgatccagctgagttggctgattatcaacatcga
aaacgtaaagcgtttgaagacaatttacgaaagaaccgaatggttgttagcaattggatc
aaatatgcacaatgggaagaatcacagaaagaaattcaacgtgcccgctcaatttgggaa
agagctatcgacaacgatcaccgaaatatcacaatatggctgaaatatattgaaatggaa
atgaagaacaaacaagtaaatcatgctcgtaatctttttgatcgtgctgttacaattcta
ccgagagtcaatcaattttggtacaagtatgtttatatggaggaaatgttggaaaactta
ggaggagcccgtgctgtatttgaaaggtggctcgaatttcttccggaagagcaagcatgg
aatacttatattaactttgaactaagatataaagaaatagaccgagctcggaagatttat
gaaagactggtaatggttcatccggatataaaaaattggatcaaatttgctcgatttgaa
gagaatcatggctttatcaatggcgctcgcaaaatatatgagaatgcgatcgaatttttt
ggcgaagaccacatggaagagaagctttttattgcatttgcacgatttgaagaaggacaa
aaagaacatgatcgcgtccgcgttatttacaaatatgcccttgaacatttaccaaaagac
agaacaaatgatctttacaaagcgtacacgattcacgaaaagaagtatggagatcgttcg
ggaatcgaagacgtaattgtttcaaagcgtaaattccaatacgaacaagagattggtgat
aatccaacaaattatgatgcttggtttgattatttgcgtttaattgaaaatgagggtgat
gcggaaaccattcgagaaacatatgaacgagctattgctaatgttccacctagcaaagat
aaaagtttgtggcgaagatatatctatttgtggataaattatgctttgtatgaagaaatc
caagcacaaaatgaagagcgcactcgtcaagtctataaaacttgtctggaagttattcct
cataaaatatttactttcagtaaaatctggttgatgtatgctcaattcgaaattcgttgt
aaaaatttatcgaacgcacgaaaagcattgggacaagcgattggcatatgtccacgtgat
aaactttatcgtggttatattgaattagaaattcaattgcgagaatttgaccgatgtcgc
ctgctatatcaaaaatttttggaattcgggccagaaaactgcataacctggataaaattc
gctgaacttgaaaccttattaggtgacttcgatcgagcacgtgctatatttgaactagca
ataaatcaaaatcgtcttgacatgccagagttgttgtggaaagcgtatatcgattttgaa
gtaaatcaaagcaaaaatgaattggcgcgccagctctatgagagactccttgaacgtaca
attcacgtaaaagtttggatttcatacgcaaaatttgaatttacatgtgaagaaaatgat
gaatatttaaatatatcattggcgcgtagaatttatgaacgagcgaatgatgcactcaaa
aattcacccgaaaaagaaaaccgcgttgttttattagaggcttggcgcgattttgaaaat
gaacatggaactcgtgacacatacgaaaaggtcatggagaaacttccacgaagaatcaaa
aagagacaaaaaatcatttccgacaccggaaccgaagaaggctgggaggaagtgtttgat
tatatatttccagaagatgaaatggctagaccgaatctaaaattactcgcagcagctaaa
aattggaaaaagaaacaaaccactgatcaaaccacacaaaatggaaatgatgttgaaaac
aatgtgaatttttga
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