Contarinia nasturtii (swede midge): 116347163
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Entry
116347163 CDS
T08003
Name
(RefSeq) serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116347163
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cns01009
]
116347163
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cns03019
]
116347163
03036 Chromosome and associated proteins [BR:
cns03036
]
116347163
Protein phosphatases and associated proteins [BR:
cns01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
116347163
Messenger RNA biogenesis [BR:
cns03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
116347163
Chromosome and associated proteins [BR:
cns03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
116347163
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
B56
DUF5683
Motif
Other DBs
NCBI-GeneID:
116347163
NCBI-ProteinID:
XP_031633510
LinkDB
All DBs
Position
Unknown
AA seq
532 aa
AA seq
DB search
MASGTFVDRIDPFAKRSLKKKSKKSQGSSRYRNSQDVELQPLPQLKADSSSLDQEELFIK
KLRQCSVSFDFMDPVSDLKGKEIKRAALNDLSTYITHGRGVLTEAVYPEIIRMISLNLFR
TLPPSENPDFDPEEDDPTLEASWPHLQLVYEVFLRFLESQDFQATIGKKVIDQKFVLQLL
ELFDSEDPRERDFLKTVLHRIYGKFLGLRAFIRKQINNIFLRFIYETEHFNGVGELLEIL
GSIINGFALPLKAEHKQFLVKVLLPLHKVKCLSLYHAQLAYCVVQFLEKDAVLTEPVVRG
LLKFWPKTCSQKEVMFLGEIEEILDVIDPPQFVKIQEPLFRQIAKCVSSPHFQVAERALY
FWNNEYAMSLIEENNTVIMPIMFPGLYRISKEHWNQTIVALVYNVLKTFMEMNSKLFDEL
TASYKAERQKEKKREREREELWKKLHELEISRTNRMLMNSSNSDTIQSPTNTSTSASSNP
FSSTTTSTITKTNTTSAASAAAASAAGSINPSADSTGDTYNLIKKESVLKED
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgggaacatttgttgatcgcatcgacccatttgctaaacgatcactcaaaaag
aaaagtaaaaagtcgcaaggctcatccaggtacagaaactcgcaggatgtagaactgcaa
ccgctgccgcagctaaaagccgacagttccagtttggatcaagaggagctttttataaag
aagttacgtcaatgcagcgtttcgtttgattttatggatccagtgtcagatctaaaggga
aaagagatcaaacgtgctgcacttaatgatctatccacctacattacccatggtcgaggt
gtactaacagaagctgtttatccggaaatcattcgaatgatatcgctaaatctgtttcgg
acattaccgccgagtgaaaatccggactttgacccagaggaagatgatcctactttagaa
gcatcctggccacatttgcaattagtttatgaagtgtttttacgatttctagagtcacaa
gattttcaagcaactataggaaagaaagtgatcgaccaaaaattcgtgctacaactgttg
gaattattcgattcagaagatccacgagaaagagatttcctaaaaactgtgttgcatcgt
atttatggaaaattcttggggcttcgggctttcatacgtaaacaaatcaataacatattt
ttgcgctttatttatgaaaccgaacacttcaacggagtcggtgagctgttggaaattctg
ggcagcattataaacggtttcgcattacctctaaaagcggagcataagcagtttctggtc
aaagttctgttgccacttcacaaagtgaaatgtttatcattatatcatgctcagctagct
tactgtgtggtacaatttctggagaaggatgccgttctgactgagccagtcgtgcgtggt
ctcttgaaattttggccgaagacatgttcacaaaaggaagtaatgtttttaggtgaaata
gaagaaattttggatgtcatcgatccaccgcaatttgtgaaaattcaagagccactattt
cgtcaaatcgccaaatgtgtctccagtccacattttcaggttgcagagagagcgctgtac
ttctggaataatgaatatgccatgtctcttattgaggaaaataatactgttataatgcca
attatgtttcctggtctgtatcgtatcagcaaagaacattggaatcaaacaatcgttgcg
ctcgtttacaatgtcctaaaaacatttatggaaatgaattcgaagctgtttgatgagctg
accgcgagttacaaagctgaacgacaaaaagagaagaagcgagaacgcgaacgcgaagaa
ttatggaaaaaattgcatgagctggagattagtcgtacaaatagaatgctgatgaattca
tccaatagcgatacaattcaatctccgacgaacacctcaacatctgcatcaagtaatcca
ttttcgagcacaaccacttcaaccataacaaagactaatactacaagcgccgctagtgct
gccgccgcctcagcagccggctcaataaatccatcggctgatagtacaggagacacatat
aatttaattaaaaaagaaagtgtattaaaagaggattaa
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