Contarinia nasturtii (swede midge): 116349475
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Entry
116349475 CDS
T08003
Name
(RefSeq) sodium channel protein para isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cns04040
]
116349475
Ion channels [BR:
cns04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
116349475
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
PKD_channel
IQ_SCN5A_C
GPHH
Motif
Other DBs
NCBI-GeneID:
116349475
NCBI-ProteinID:
XP_031636761
LinkDB
All DBs
Position
Unknown
AA seq
2162 aa
AA seq
DB search
MIDDLSSISEEERCLFRPFTRESLVVIQGRIAEEQRKLKELERKRAEGEVPQYGRKKKQK
EIRYDDDDEDEGPQPDPTLEQGAPIPVRLQSSFPAELASTPLEDIDNYYSNQLTFVVVSK
GKDIFRFSATKAMWLLDPFNPIRRVAIYILVHPIFSCLIIFTILTNCVLMIMPASPIVES
TEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVITLAYVTMGIDLGNLAALR
TFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQIYMGVLTQK
CIRQFPLDGSWGNLTDENWDNFMKNDTNWFKEEGALEYPLCGNSSGAGTCPEGYFCLQGF
GKNPNYGYTSFDTFGWAFLSAFRLMTQDYWENLYQLVLRSAGPWHMLFFIVIIFLGSFYL
VNLILAIVAMSYDELQKKAEEEEAAEEEALREAEQAAVAKQAKIEAHAAAAANAAAAAVA
AAEAAAHPEMAKSPSDFSCHSYELFVGQEKGNDDNNKEKMSIRSEGLESVSEMQRPTAPS
AGTMASKVRKVSTTSLSLPGSPFNIRRGSRGSHQFTIRNGRGRFGIPGSDRKPLVLSTYL
DAQEHLPYADDSNAVTPMSEENGAIIVPVYYTNMGILGSRHSSYTSHQSRISYTSHGDLL
GTKEQKLRHRSRNQSVVTQQPFAGPYTDINHKGHRDYDHGSDYTDEAGKIKHSNDNPFIE
PVHGQTVVDMKDVMVLNDIIEQAAGRQSREGDQGVSVYYFPTEDDDDDDDGPTFKEKLTA
FSMRMIDMFCVWDCCAPWLKLQSWISFIVFDPFVELFITLCIVINTLFMALDHHDMNRNI
ERILKTGNYFFTATFAIEATMKLCAMSPKYYFQVGWNIFDFIIVALSLVELGLEGVQGLS
VLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNY
VDRVFLFPDGDMPRWNFTDFMHSFMIVFRVLCGEWIESMWDCMLVGDVSCIPFFLATVVI
GNLVVLNLFLALLLSNFGSSSLSAPAADQDTNKIFEAFNRIGRFQRWIKQGICNALKSIK
NKLTNQISDQPGERTHHNSWIWNEGKGICGCMSTEHGDNELELGPDDILVDGLIKKGIKN
QSELEVAIGDGMEFTIHGDLKSKNKKTKTLLNNAKMIGNSINHHDNRLVHELNHRGMSLQ
DDDTASIKSYGSHKNRMFKDESHKGSAETLDGEEKRDASKEERMDMERDLDDDIEGEESL
GDDGVDVIHAEEDELIEEGPIDCLPESCYTKFPIFAGDEDSPFWQGWGNLRLKTFRLIEN
KYFETAVITMILLSSMALALEDVHLPQRPILQDILYYMDRIFTVIFFLEMLIKWVALGFK
AYFNNAWCWLDFVIVMVSLINFVASLCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVV
NALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKYFKCVDSNKTTLSHEIIPDRNTCEA
ENYTWENSRMNFDHVGKAYLCLFQVATFKGWIQIMNDAIDSRDIDKQPIRETNIYMYLYF
VFFIIFGSFFTLNLFIGVIIDNFNEQKKKAGGSLEMFMTEDQKKYYNAMKKMGSKKPMKA
IPRPRWRPQAIVFEIVTDKKFDMVIMLFIGFNMLTMTMDHYQQTEQFSMVLDYLNMIFIC
IFTSECLLKIFALRYHYFVEPWNFFDLVVVTLSILSLALSEFIEKYFVSPTLLRVVRVAK
VGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFFMHVKDKSGLD
DVYNFKTFPQSMILLFQMSTSAGWDGVLDGIINEEDCNPPDNDRGYPGNCGSSTIGITFL
LSYLVISFLIVINMYIAVILENYSQATEDVQEGLTDDDYDMYYEIWQQFDPEGTQYIRYD
QLSDFLDVLEPPLQIHKPNKYKIISMDIPICRGDLMFCVDILDALTKDFFARKGNPIEET
GELGEIAARPEEEGYEPVSSTLWRQREEYCARLIQNAWRKHKLHKETPYATGDETDVDQN
NAGGGGGVSGGGGGTSGASGGNGNINIHSNSNNNDNSDGNNMNGIAAAVAAAAAASDAKF
EPDNDCDDGNTSPSKDKDGDNGSQGRQTAVLVESDGFVTKNGHRVVIQHSRSPSTTSRSA
DV
NT seq
6489 nt
NT seq
+upstream
nt +downstream
nt
atgatagacgatttaagttcgatatccgaggaagaacgctgcttgttccgtcccttcacc
cgcgaatcattagtcgtaattcaaggtcgtattgctgaggaacaacgtaaactaaaagag
ttggaaaggaaaagagccgaaggagaggtaccacaatatgggcgaaagaaaaagcaaaaa
gaaatccgatatgatgacgacgatgaagatgaaggcccacaaccggatcctacactcgaa
cagggtgcacctatacctgttcgattgcagtcttcttttccagcggaactggcctccact
cctctcgaggatatcgacaattattattcgaatcaactgacatttgtagttgttagtaaa
ggaaaggatatttttcgcttttccgcaaccaaagcaatgtggttacttgacccgtttaat
ccaattcgtcgtgtagctatttatattttagtgcatccaattttttcttgtttaatcatc
tttacaattctcacaaattgtgtattaatgataatgccggcgtcgccaatcgtcgaatca
accgaggtgatattcactggaatctacacatttgaatcagctgtaaaagtgatggcccgc
ggtttcattttgtgtccgttcacgtatctgcgtgatgcgtggaattggctggatttcgta
gtaataacattagcctatgtgacaatgggaatcgatttgggtaatttagcggcgttgcgt
acatttcgtgtactgcgtgccttgaaaactgttgccattgtaccgggtttgaagaccatc
gttggtgctgtcattgaatcggtaaaaaatctgcgcgatgtgataattttaacgatgttt
tcgttatcggtattcgctttgatgggcctgcaaatttacatgggcgtgctaacgcaaaaa
tgcattcgccaatttccattggatggctcatggggcaatttaaccgatgaaaattgggat
aattttatgaaaaacgacacaaactggtttaaagaggaaggtgcactggaatatccacta
tgtggtaattcatcgggtgccggaacatgccctgaaggatatttctgtttgcaaggcttc
ggaaagaatccaaactatggctacaccagttttgatacattcggttgggcgtttttatcc
gcttttcgtctgatgacacaagattactgggagaatttgtaccaattagtgttaagatct
gccggaccgtggcacatgcttttcttcatcgttatcatatttcttggttcgttctatctc
gttaatttgatcttggctattgtcgccatgtcatacgatgaactccaaaagaaagccgaa
gaagaagaggcagccgaagaggaagcgcttagagaagctgaacaggcagcagtagcaaaa
caggcgaaaattgaagcgcatgcagcggcagcagcgaatgcagcagccgctgcagttgcg
gcggccgaagctgcagctcacccggaaatggcaaagagtccatcggatttttcatgtcat
agttacgaattgttcgttggccaagagaaaggaaacgatgacaacaacaaggagaaaatg
tcaatccgtagcgaaggattggagtcggtgagcgaaatgcaaagaccaactgcaccatca
gccggcacaatggcgtccaaggttcgcaaagtcagcacgacatcgctgtctttacccggt
tcaccgttcaatattcgaagaggttcacgcggttcgcaccagttcacgattcgaaatggt
cgcggtcgttttggtataccaggtagtgatcgtaaaccattggtactatcgacgtatttg
gatgcacaggaacatttaccatatgctgatgattcaaatgcggttactccaatgtccgaa
gaaaatggggccatcattgttccagtttactacacaaatatgggtattttaggatcaaga
cattcatcatatacatcacatcagtctcgcatatcatacacatcgcacggtgatttacta
ggaactaaagaacaaaaacttagacatagatcacgaaatcaatcagtagttacgcaacaa
ccatttgccggtccatacaccgatatcaatcacaaaggtcatcgagactacgatcatgga
tcagattatactgatgaggctggtaaaataaaacatagtaacgacaatccgtttattgaa
cccgtccatgggcaaactgttgtagatatgaaagatgtgatggttttgaatgacatcatt
gaacaagctgccggtagacaaagtcgtgaaggtgatcaaggtgtttctgtctactatttt
ccaacagaagacgatgatgatgacgacgatggtccaacgttcaaagagaaattaacagca
ttttcaatgagaatgattgacatgttttgcgtatgggattgttgtgcgccatggttaaaa
cttcaaagttggatttcattcatcgtatttgatccgttcgtagaattatttatcacattg
tgtatcgtaataaacacattgttcatggcacttgatcatcacgacatgaatcgtaatata
gagagaatcttgaaaactggcaattatttttttacggcaacatttgccatcgaagcaacg
atgaaactctgcgcaatgagtcccaaatactatttccaagtcggttggaatatattcgat
tttataattgttgcactatcattggttgagctcggactggaaggtgtacaaggattgtct
gtattacgatcattccgtttgcttcgagtattcaaattggccaaatcgtggccaacattg
aatttattaatttcgattatgggccgaacgatgggcgctttaggtaatttgacctttgta
ttgtgcattattatcttcatatttgccgtaatgggaatgcaactatttggaaaaaactac
gtcgatcgtgtatttttatttccggacggtgacatgccccgatggaatttcacggatttt
atgcattcatttatgattgtgtttcgtgtattgtgcggagaatggatcgaatcaatgtgg
gactgtatgttagtcggtgacgtttcatgtatcccattttttctagccaccgttgtcatt
ggcaatttagtcgttctcaatcttttcttggccttgcttttgagtaatttcggttcatca
agtttatcagcgccggctgccgatcaagatacaaataaaatatttgaagcattcaatcgt
atcggtcgatttcagcgttggattaaacaaggcatatgcaatgcacttaaatctataaaa
aataagctaacaaatcaaatcagcgatcagccaggtgagcggacacatcacaacagttgg
atatggaatgaaggcaaggggatatgtggttgtatgtcaacagaacatggtgataatgaa
ctcgagttaggacccgacgacatcctggtggacggtctcataaaaaaaggtatcaaaaac
caaagcgaactcgaagtggccattggcgatggcatggaattcaccattcacggcgatctc
aaatccaaaaataaaaagactaaaacacttctgaacaatgccaagatgattggaaattcg
ataaatcatcatgacaatagattagttcatgaattaaatcatagaggtatgtccttgcag
gacgacgatacggctagcattaaatcatacgggagccataaaaaccgtatgttcaaagat
gaaagtcacaaaggtagcgctgaaacattggacggagaagagaaacgcgatgcaagcaaa
gaggagcgtatggacatggaacgcgatttagatgacgatattgaaggagaagagagtctc
ggtgatgatggtgtggatgtgatacatgcagaagaagatgaacttatagaagaaggacca
atagactgcttaccagaatcgtgttacacgaaattcccaatatttgccggtgacgaagac
tcaccattttggcaaggatggggcaatttacgtctgaaaacatttcgtttaatcgaaaat
aagtacttcgaaacggccgtcatcacaatgattttactgagtagtatggctttagcactt
gaagatgttcatctacctcaacgaccgattctacaagatattctgtattacatggatcgc
atattcaccgtgatattcttcttggagatgttaatcaagtgggttgcgctcggttttaaa
gcatacttcaataatgcttggtgctggcttgatttcgtcattgttatggtgtcgttaatc
aactttgtcgcttcactttgtggagccggaggcattcaagcgttcaaaacaatgcgaacg
cttcgagctctgagaccgctacgtgccatgtcccgtatgcagggcatgagggttgtcgtt
aatgcactggtgcaagctataccgtccatcttcaacgtattgttggtgtgtttaatcttt
tggcttattttcgctattatgggtgtacagctttttgccggaaaatatttcaagtgtgtc
gatagtaataaaactacattaagtcacgaaatcatcccggatcgaaatacatgtgaagcg
gaaaattatacgtgggaaaattcgcggatgaatttcgaccacgtaggcaaagcgtatttg
tgtctatttcaagtggctacattcaaaggatggattcaaattatgaatgatgccattgat
tcacgtgatattgacaagcagccgattcgtgaaacaaacatttatatgtacttgtatttt
gtattcttcatcatattcggatcattctttacgctgaatctattcattggtgtgattatc
gataactttaatgagcaaaagaaaaaagcaggcggttcattagaaatgttcatgactgag
gatcagaagaaatactataatgcaatgaaaaaaatgggttcaaagaaaccaatgaaagcg
ataccaaggcctagatggcgaccgcaagcaatagtgttcgaaatagtaaccgacaaaaaa
ttcgatatggtcatcatgttgtttatcggttttaatatgctgaccatgacaatggatcat
tatcaacaaacagaacaatttagcatggttttagattatttaaatatgatatttatttgt
atattcaccagtgaatgcttattaaaaatcttcgcacttcgataccattattttgtcgag
ccatggaatttctttgatttagttgtagttacattgtccattttaagtcttgcactaagc
gaattcatcgaaaaatattttgtatcgccaacattattgcgtgtagttcgtgtagctaaa
gtaggtcgcgttttacgtttggttaaaggtgctaaaggtatccgtacgctgctgtttgcc
ttggcaatgtcgctgccagccttatttaatatatgtctgctactatttctcgtgatgttt
attttcgctatattcggcatgtcattttttatgcatgtcaaagacaaaagcggtttagac
gatgtatataattttaaaacgttcccgcagagcatgatcctattgtttcaaatgtctacc
tcagctggatgggatggtgtgctggatggtataataaatgaggaagattgtaatccacca
gataatgatcgtggctatccgggaaattgcggttcatcgacaatcggtatcacattttta
ctgtcgtatttggtgatcagtttcttgattgtcatcaacatgtatattgccgtcattttg
gagaattattcacaagccaccgaagatgtgcaagagggtttaaccgatgatgattacgat
atgtactatgaaatttggcagcaattcgatccagagggtacacaatacatacgctacgat
caattgtctgattttcttgatgtgcttgagccaccgttacaaattcacaagccgaataaa
tacaaaatcatctcgatggatataccaatttgtcgaggcgatttaatgttttgcgtggat
attttggacgcgttgacaaaggatttctttgcacgcaaaggtaatccaattgaggaaacc
ggagaacttggcgaaattgcggcgcggccggaagaagaaggctacgaacctgtttcgtct
actctctggcgtcaacgcgaagaatactgtgctcggctgattcaaaatgcgtggcgcaag
cacaaattgcataaagaaacaccctatgcaacgggtgatgaaactgatgtggatcaaaat
aatgctggcggcggcggtggtgttagtggtggtggtggcggaacgagtggtgctagtggt
ggtaatggaaacatcaatatacattccaattcaaataacaatgataatagtgatgggaac
aatatgaacggtattgctgcggcggtggcggcagcggcagcagctagcgacgcaaaattt
gagcccgataatgattgcgacgatggcaatacatcaccatcaaaggataaagatggagat
aatggtagccaaggacggcaaactgctgtgcttgttgaaagtgatggtttcgttacgaaa
aatggccatcgcgttgtgatacaacattcccgttcacccagcacaacatcaagatcggct
gacgtctga
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integrated database retrieval system
