Contarinia nasturtii (swede midge): 116350950
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Entry
116350950 CDS
T08003
Name
(RefSeq) PAX3- and PAX7-binding protein 1
KO
K13211
GC-rich sequence DNA-binding factor
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cns03041
]
116350950
Spliceosome [BR:
cns03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
116350950
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
DUF4192
VipD-like_C
Motif
Other DBs
NCBI-GeneID:
116350950
NCBI-ProteinID:
XP_031638829
LinkDB
All DBs
Position
Unknown
AA seq
919 aa
AA seq
DB search
MSLFRRPKKPVVNRRVFSAADDDDHSENLENENSGRKNGEDCSKMDVDSRVTTPPPPCIS
DSRKHDKKSKDDKKTSSKKSSLLSFGHDEEEETEVFQVKKSSQSKKVMKMLDKERRRKKH
REKDSSTSVADEFTSHDNYGKTNNGFNNKTNAYDVVRATSYERATSNMDDGNDDLANKKR
SKSSQISNSSIHTEIRTDDFVLVVKKTENETGLVLNGRAALCAGRDDMSSEDDSDTTNEH
RFRQPDSFKALLESGAIPDARMIHEARKKRQKARELGDFVPVEENKPVDNKKGRLIREEA
EDDASDDERVDMSAITGQKELEERREKFYSVQGQGSDEDSDLDMHEWESQQIRKAISGSQ
LINAQQEAYSHFIIRDGSNDSSAGVVAQVSTRNLLEKAYANSNIQKSQSIKTNQKSEKKS
GPRMPNEIRDLVKERLKQVKELNNTHLNQIQKITNDMNAIALEELECEQNAPIVASKYRF
YQELKGYVLDLIECFDEKLPKINELERKHVAAVVKYSNFLIERRRQDVRDQAREVTQTQK
PTNLASMNSAARKEEEQRVQRTAEREGRRTRRRRDRERKETPNDHLDGMSSDDEIPDHES
TFYKNQLKQISAEATLVFEDVTDDYSDLGTILKHFEDWRNRDLDSYKDTYFSLCLPKIIG
PMLRLQLLTWNPLENDCKDLEKMEWYETVMKYGFKPNETVAQLFDDPDIRLVPTLMEKIA
LPKITEFIEKAWDPLSSTQTLRLVTLIKRLIDCYPSLKPTSKYMRNLFTIILDRMKVSLE
NDVFIPIFPKQLQEAKTSFFQRQFSSALKLFRNLLSWEGILSDSALREIAISSLLNRYLL
SAIRICTPMDAANKSHIIINTLPCVWLQQSSILTSLDLFIQFLRSLMTQLETDNPLHSGA
IMKTKQIFETLRLPMTPSN
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgtccttgtttcgacgtcctaagaaaccggttgtaaatcgtcgagtgtttagtgctgct
gacgatgatgaccacagtgaaaatttggaaaatgaaaatagcggtcgaaagaatggtgaa
gactgttcaaaaatggatgtggacagtagagtgacaacacctcctccaccttgcataagt
gattcgcgtaaacatgacaaaaagtcgaaagacgataagaagacaagtagtaaaaaatca
tcactactaagtttcggccatgatgaagaggaagaaactgaagtgtttcaggtgaaaaaa
tcatctcaatcaaaaaaggttatgaagatgctagacaaagagcggcgcaggaaaaaacat
cgagaaaaagattcatcaacctcagtggccgatgaattcacgtcgcatgacaattatggc
aaaaccaacaacggtttcaacaacaaaacaaatgcatatgacgttgttcgggcaacgtca
tatgaaagagctacgtccaatatggacgatggcaacgatgatttggccaataaaaaacgg
tcaaaatcatcacaaatttccaattctagcatacatactgaaatacgcactgacgacttt
gtgcttgtggttaaaaagacggaaaatgaaacaggtcttgtgttgaatggtcgagcagct
ctttgtgcgggacgtgatgatatgtcatctgaagatgattcggatacgacaaatgaacac
cgtttcagacagccagacagttttaaggctttacttgagagtggtgccattccggatgca
cgaatgattcatgaggcgcgtaaaaagagacaaaaagcgcgtgaattaggtgatttcgta
ccggttgaagagaataaaccggttgacaataagaaaggccgtctaatacgtgaagaagcc
gaagatgatgcatcagacgatgagcgagtcgacatgtcggctatcactgggcaaaaagag
ttggaagagagacgtgaaaaattctattcggttcaaggacaaggttctgatgaggattct
gatttggacatgcatgaatgggagagtcagcaaattcggaaggccataagtggttcgcag
ttaataaatgcacagcaagaggcgtattcacatttcataataagggatggttcaaatgat
tcatctgccggtgtagttgcgcaagtttcaactagaaatttattggagaaagcttatgca
aattcaaatattcagaaatcgcaatccatcaaaacaaatcaaaagtcagaaaaaaaatcg
ggccctcgaatgcccaacgaaattcgcgacttggttaaagagcgactaaaacaagtaaaa
gagttgaataacacgcatttgaatcaaatccaaaaaatcaccaacgatatgaatgcaatc
gcattagaagaactggaatgtgagcaaaatgcaccgattgttgcatcaaaatatcgattc
tatcaagagctcaaaggctatgtactggatctgattgaatgttttgatgaaaaacttccc
aaaataaatgaattggagcgaaaacatgttgctgctgtggtgaaatattcaaattttctt
attgaacgtcgacgtcaagatgttcgcgaccaagccagagaagtaacccagacacaaaag
cccactaatttggcatcaatgaatagtgcagctcgaaaggaagaagaacaaagagtgcaa
cgcactgctgagagagaagggagaagaactcgacgacgaagagatcgtgaacgcaaagag
actccaaatgaccatctcgatggtatgtctagtgatgacgaaattcctgatcatgagagc
actttttataagaaccaattgaaacaaataagtgctgaggcaacactggtgttcgaagat
gtcacagatgattactctgatttaggaacaattttgaagcactttgaggattggcgcaat
cgcgatcttgattcttacaaagatacttatttcagtctttgcttaccgaagatcattggt
ccgatgttgagattacaactgttgacttggaatccactggagaatgattgtaaagatttg
gaaaaaatggagtggtatgagaccgttatgaagtacggatttaaaccaaacgaaacagta
gctcagttgtttgatgatccagatattcgattggtgccaacattaatggagaaaatagct
ctaccaaaaataaccgaattcattgaaaaggcttgggatccgctatcttctacgcaaaca
ctccgtttagttactttaataaaacgattgattgactgttatccgtcactaaagccaacg
tccaaatatatgcgaaatttatttacaataattttggatagaatgaaagtatcacttgag
aacgatgtattcataccgatatttccgaagcagttacaagaagcaaaaacatcatttttc
caacggcaattcagcagtgcgttgaaactctttcgaaatctattgagttgggagggaata
ctttctgatagtgccctaagggaaatagccatatcgtctttgcttaatcgatacttactg
tcagcaatacggatatgtacaccgatggatgcagcgaacaaatcacacataataatcaac
acattgccttgtgtttggctccagcaaagctccatacttaccagtctggacttatttatt
cagttcttacgatccctgatgacccaactagagaccgataatcctttgcatagcggagcg
attatgaaaacgaagcaaattttcgagacgcttcgattaccaatgacgccgtctaattga
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