Contarinia nasturtii (swede midge): 116352602
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Entry
116352602 CDS
T08003
Name
(RefSeq) structural maintenance of chromosomes protein 4
KO
K06675
structural maintenance of chromosome 4
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cns03036
]
116352602
Chromosome and associated proteins [BR:
cns03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
116352602
Condensin II
116352602
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
TMF_DNA_bd
DUF7491
HMMR_N
ATG16
AAA_29
Crescentin
ABC_tran
SbcC_Walker_B
Motif
Other DBs
NCBI-GeneID:
116352602
NCBI-ProteinID:
XP_031641184
LinkDB
All DBs
Position
Unknown
AA seq
1371 aa
AA seq
DB search
MSSPLDERKSSGDADGNQSNGIQTAAPSQSESAERPSDQSQLDEDDDPASMYEDEEGGYR
VGDIFIPPPIKPYCSSESHGSRLIITHIMNKNFKSYAGDVMLGPFCQCFQAIVGPNGSGK
SNVIDSMLFVFGYRSNKIRCKKLSLMIHKSKKFPNIDSCSVAVHFARIEDRSDGTYQTVE
GSAFFITRVVHQNNSSYYTINDRRVQFKDVAILLKKYNVDLDYNRFLILQGEVESIAMMK
PKAQNENESGFLEYLEDIIGTKRYKEPLQKISTRVDVMTEERDEKHNRCKLTERELNDLK
EPMEEAVAYLKLENDLARTKNKETQIHIYNTQVSLEKCEVDLEEKAKDLKEHDMKYEAII
AERREKEEGIKAEMAVYEQILKKKEDHEQMKKNADRKYDEVHSSMEATNDRRKQIIEMVK
KKEAELEELKRVPAKNEKEILDCEKKAERFTHERDEAKDLLQRNFLKLQDEIKPLTEKKH
QLEEELANVQLAQDQAKADLDVSENELKLVQQTESTERRKYEMYEESLKNAKETLERRRE
ELTEGEKVIPGIRDDIAKCEQEIHAFKTEENKLKIEVANLRSLIEGKSHTIQQARSNNKV
LEYLMQKKIQGELPGVLGRLGDLGGIDNKYDVAISTCCGRLDNIVVDTVETAEKCINSLK
ADNIGRAAFIALEKIEHYAEHAGPIQTPENASRLYDLVRIEDERLASAFYFALRDTLVAN
DMDQATRIAYGTKRYRVVTLKGEVIETSGTMSGGGGRQFRGKMGEQVKTKTATSHNTSVG
NNTTIDDLDQLRAKVQDIANGINYAQQMQGEKGKTLAELKAKLPKEEANLKRFKTDITAY
AQQIPGLETQLEDQRKIMEETRSDEKRVADLNSEIAERKKVFDKCQGDTKILQDQVDAVN
QEIETMTEDQIGAVEKSVQNLEKQIKKLSNQVTKLKVETEASERNVKNAEENIATMKEDI
DNAQNDLRRMHEERAQAGNDAAEIDERLQNIIKQLSETRNGSSDATKEVIALQKQESDAK
LQRVELEQTVKKFEKTVRDMKASIPYYKKRLEPLKLHKLPNEDTPQPLKTYTNEELATYS
IDEIQYRVEVIEGELKSKTLNINVIDEYQKKLDVYMERIKVLEDITTKRNEMRKLLDDVK
KRRYNEFMSGFNIITHKLKEMYTMITQGGSAELELVDSMDPFSEGISFSVRPNRKSWKNI
SNLSGGEKTLASLALVFALHYYKPSPLYFMDEIDAALDFKNVSIVANYIKERTKNAQFII
ISLRSNMFELADYLTGIYKIDDCTDAITIENAVPPLPIPSGSQAIPSSQFSTIDSAVPSQ
SMFMSQNTLQSQQKPEQSSASFSGNDTTEDEINNSIQQDEDQDGDQGQEDK
NT seq
4116 nt
NT seq
+upstream
nt +downstream
nt
atgagctcgccgttagacgaacgaaaaagtagcggtgatgccgacggtaatcaatccaac
ggtattcaaacagccgcaccaagccaaagtgaatcagcagaaagacccagcgatcaatcg
cagctggatgaagacgacgatccggcgtctatgtatgaagatgaagaaggtggatatcgc
gtgggtgacattttcataccgccaccaatcaaaccgtactgttcaagtgaatcacatgga
tctcggctcatcataacccatattatgaataaaaacttcaaaagttatgcgggcgatgta
atgctgggaccattttgtcaatgttttcaggccatcgttggaccgaatgggagcggaaaa
tcaaatgttatcgattcaatgttgtttgtatttggttatcgttcgaataaaatccgatgc
aaaaaactctcgctgatgatacacaaatcgaaaaaatttccgaacattgacagttgtagt
gtggctgttcattttgcacgaatcgaagaccgtagtgatggaacatatcaaacagtggaa
ggcagtgcattttttatcacacgtgtagtgcatcagaataattcatcatattatacaatc
aatgatcggcgtgtacaattcaaggatgtggcaattctgctcaagaaatacaacgtcgat
ttggactacaatcgattcttaatattgcagggtgaagttgaatcgattgcaatgatgaag
cccaaagctcagaacgaaaacgaaagtggttttttggagtacttggaagacatcatcggt
acaaaacggtacaaggaaccattgcagaaaattagtactcgtgttgacgtcatgaccgaa
gagcgagacgaaaagcataatcgctgcaaattgaccgaacgtgagctgaacgatttgaag
gagcccatggaagaggctgttgcatatttgaaattggaaaacgatttagctcgaacgaaa
aacaaggaaacacagatacacatatacaacactcaagtgagcttggaaaaatgtgaggtc
gatttggaggagaaagcaaaagatttgaaagagcacgacatgaaatatgaggccatcatc
gcagaacggagggaaaaagaggaaggcatcaaagctgaaatggcagtttatgagcaaatt
ttgaagaaaaaagaagatcacgaacaaatgaagaaaaatgccgacagaaaatatgatgaa
gtccactcatcaatggaagcgacgaatgaccgtcgaaaacaaatcatagaaatggtaaaa
aagaaggaggccgaactagaagaattgaaacgtgtcccggccaagaatgaaaaggaaatc
ctcgactgtgaaaagaaagccgaacgttttacgcatgaaagggacgaagctaaagattta
ttgcagcgcaattttttgaagcttcaagatgagataaaaccattgacagagaaaaaacac
caattggaagaagagctggccaacgttcaattagctcaagatcaagccaaagccgatttg
gatgtcagtgaaaatgaattgaaattggttcaacagactgaatccaccgagaggagaaaa
tatgagatgtatgaagaatcattgaaaaatgcaaaggaaacattggaaagacgtcgtgag
gaattaaccgaaggtgaaaaggttataccagggattagagacgatattgccaaatgtgaa
caggaaatccatgcatttaaaacagaagagaacaaactcaaaattgaagtggccaatctt
cgttcattgattgaaggaaagtcacatacgatacagcaagctcgatccaacaataaagtc
cttgaatatttaatgcaaaagaaaattcaaggagaactaccaggtgtactgggtcgtctg
ggagatttgggtggcattgataataagtatgacgttgccatatcaacatgctgtggacgt
cttgataacattgttgtcgacacagttgaaacagccgaaaagtgtataaacagtttgaaa
gcagataacattggacgtgcagcattcatcgctttggaaaagattgaacattatgctgag
catgccggtccaattcaaacgcctgaaaatgcgtcacgactatatgatttggttcgtatc
gaagatgaaagattggcctcagcattctactttgccttgagagatactctcgttgcaaac
gacatggatcaagcaacgagaattgcatacggtacaaagcgctatcgtgttgtaacattg
aagggcgaggtaattgaaacgtccggcacgatgtccggaggtggtggtaggcaatttcgt
ggcaaaatgggcgaacaagtaaaaaccaaaacggctacatcacataacacatcagttggc
aacaacacaaccattgacgatctcgatcaattacgtgcaaaagtacaagatatcgcaaat
ggaattaactatgcacagcaaatgcagggggaaaaaggaaaaacattggccgaattaaag
gcaaagctgccaaaagaggaggcaaatttgaaacgattcaagacagatataacagcatat
gcacaacaaattccaggactcgaaacccaactcgaagatcaacgcaaaatcatggaagaa
acacgttcagatgaaaaacgggttgccgatctaaatagtgaaatcgccgaacgcaaaaag
gtattcgataaatgtcagggggacaccaagattttacaagatcaagttgatgcggttaat
caggaaattgaaacaatgaccgaagatcaaattggtgcagttgaaaaatccgttcaaaat
ttggaaaaacaaattaaaaagttgtcgaatcaggtgacaaaattaaaggtcgaaactgaa
gcatcggaacgaaatgtaaaaaatgccgaagaaaacattgccacaatgaaggaagacatc
gataatgctcaaaatgatttgagacgaatgcatgaagagcgagcacaggccggaaacgat
gcggccgaaattgatgaacgcttacaaaacatcattaaacaattgtccgagactcggaat
ggttcaagtgatgccacaaaagaggtcatcgcattgcaaaaacaagagtcagacgctaaa
ttgcaacgcgttgaactcgaacaaacggtgaaaaaatttgaaaaaacggtacgtgacatg
aaagcaagcattccgtactacaaaaaaagattagaaccacttaaattacataaattaccg
aatgaagacacaccacagccattgaaaacgtatacgaacgaagaattagccacatattca
atcgatgaaattcagtatcgcgttgaagttattgagggtgaactgaaatcaaagacactt
aatataaatgtaatcgatgaatatcagaagaagctcgacgtgtatatggaacgcataaag
gtgttggaagacattacaaccaaacgaaatgaaatgcgaaaattactcgacgatgtcaaa
aagcggcgttacaatgaattcatgagtggcttcaacattataacacataaattgaaggaa
atgtatacgatgataacgcaagggggtagtgccgagttggaattggttgactcaatggat
ccatttagcgaaggcatttcgttcagtgttcgtcccaatcgcaagtcctggaaaaatatt
tcaaatctatcgggcggagaaaaaacgctggcatctcttgcgttggtttttgcgttacac
tattataaaccatcaccattgtatttcatggacgaaatcgatgcggctcttgatttcaaa
aatgtatccattgttgccaactatataaaagaacgcaccaaaaatgcacaattcattatc
atctcattgcgatcgaatatgttcgagttggctgactatctgactggaatttataaaata
gatgattgtactgatgcaataactattgaaaatgctgtaccaccattgccaattccaagc
ggttcacaggcaataccatcaagtcagtttagtacaattgattcagcagtaccatctcaa
tcaatgtttatgtcacaaaacacattacaaagccaacagaaaccggaacagtcgtcagcg
tctttctctggaaatgacacgactgaagatgaaattaacaacagcattcaacaagatgag
gaccaagacggagatcagggtcaggaggacaagtaa
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