KEGG   Cobetia sp. cqz5-12: F8A90_16060
Entry
F8A90_16060       CDS       T10568                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
cobc  Cobetia sp. cqz5-12
Pathway
cobc02024  Quorum sensing
cobc03060  Protein export
cobc03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:cobc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    F8A90_16060
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    F8A90_16060
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    F8A90_16060
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:cobc02044]
    F8A90_16060
Enzymes [BR:cobc01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     F8A90_16060
Secretion system [BR:cobc02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   F8A90_16060
  Eukaryotic Sec-SRP protein
   F8A90_16060
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA Zeta_toxin AAA_22 cobW AAA_16 AAA_33 ArsA_ATPase YqeC AAA_31 AAA_30 ResIII nSTAND3 6PF2K MMR_HSR1 APS_kinase KTI12 AAA_14 AAA_28 Thymidylate_kin AAA_26 Helicase_RecD ParA TctA AAA_17 AAA_11 ATPase GTP_EFTU AAA VirC1 NACHT NPHP3_N Fe-ADH_2 TsaE AAA_19 SLFN-g3_helicase Arf KAP_NTPase
Other DBs
NCBI-ProteinID: QQK65448
LinkDB
Position
complement(3882561..3883997)
AA seq 478 aa
MFQSLSDRLSHTLKSITGQAKLTEDNIKDTLREVRKALLEADVALPVVKAFIERVRERAV
GQEVSKSLSPGQQFVKIVQQELEAIMGEANEGLTLKGSPAVILMAGLQGAGKTTTVAKLA
RYLREREKKKVLVVSADVYRPAAIDQLETLAKEVGVDFFPSDSSQQPVAIAEAAMKHARI
QFHDVVLVDTAGRLHVDADMMDEIAALHRSVNPDETLFVVDAMTGQDAANTAKAFHEALP
LTGVVLTKADGDARGGAALSVRHITGKPIKFMGMGEKVDALEPFHPDRIASRILGMGDML
SLIEEAERTVDKSKAEQLASKVKKGEGFDLEDFRDQLQQLKNMGGMGSLMSKLPGMGQLA
EVAQSQASEKELGKLEAMINSMTPKERRNPDLINGSRKRRICMGSGTQVPDLNRLLKQHK
QMAKMMKKAGKKGGMQKMMRGMSGMMGGGGGPGGPGGMGGMGGMGGPGGMGGGRFPRR
NT seq 1437 nt   +upstreamnt  +downstreamnt
atgtttcaaagtttgagtgatcgcctgtcgcatacgctgaagtcgattaccggccaggcc
aagctgacggaagacaacatcaaggacaccctgcgcgaagtgcgcaaggcgttgcttgaa
gccgatgtcgcgctgccggtggtcaaggccttcatcgagcgagtgcgcgaacgtgccgtc
ggtcaggaagtgtccaagagcctgtcgccgggccagcagttcgtcaagatcgtccagcag
gagctggaagcgatcatgggcgaagccaatgaaggcctgacgctcaagggcagtccggcc
gtcattctgatggcaggcctgcagggtgcgggcaagacgaccaccgtcgccaagctggca
cgctacctgcgcgagcgcgagaagaagaaggtgctggtggtctcggccgacgtctatcgt
ccggccgccatcgaccagctggaaacgctggccaaggaagtcggggtcgatttcttcccc
tccgactcctcccagcagccggtggccatcgccgaggcggcgatgaagcacgcgcgcatc
cagttccacgacgtggtgctggtcgataccgccggtcgtctgcatgtcgatgccgacatg
atggacgagatcgccgccctgcaccgcagcgtcaatcccgacgagacactgttcgtcgtc
gatgcgatgaccggtcaggatgccgccaacaccgccaaggccttccacgaagccttgccg
ctgaccggtgtcgtgctgaccaaggccgacggtgatgcgcgtggcggtgcggccctgtcc
gtgcgtcacatcaccggcaagccgatcaagttcatgggcatgggggagaaggtcgacgcc
ctcgagcccttccacccggatcgtatcgcctcgcgcatcctcggcatgggcgacatgctg
tcgctgatcgaggaagccgagcgcaccgtcgacaagagcaaggccgagcagctggccagc
aaggtcaagaaaggcgaaggcttcgatctcgaggacttccgtgaccagttgcagcagctc
aagaacatgggtggcatgggtagcctgatgtccaagctgccgggcatggggcagctggcg
gaagtcgcccagagccaggccagcgagaaggagctgggcaagctcgaggcgatgatcaac
tccatgacgcccaaggaacgtcgcaacccggatctcatcaatgggtcgcgcaagcgccgc
atctgcatgggttccggtactcaggtgcctgatctcaaccgtctgctcaagcagcacaag
cagatggccaagatgatgaagaaggccggcaagaaaggtggcatgcagaagatgatgcgt
ggcatgtccggcatgatgggcggtggcggtggtcctggcggccccggtggtatgggtggc
atgggtggtatgggtggccccggcggcatgggcggcggacgcttcccgcgtcgctga

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