Cardiocondyla obscurior: 139101599
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Entry
139101599 CDS
T10704
Symbol
Vps53
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
cobs Cardiocondyla obscurior
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cobs04131
]
139101599 (Vps53)
Membrane trafficking [BR:
cobs04131
]
Protein recycling
Others
EARP complex
139101599 (Vps53)
Endosome - Golgi transport
Tethering complex
GARP complex
139101599 (Vps53)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
Syndetin_C
VPS51_Exo84_N
NBD94
Baculo_PEP_C
COG5_N
Motif
Other DBs
NCBI-GeneID:
139101599
NCBI-ProteinID:
XP_070510970
LinkDB
All DBs
Position
LG04:complement(3172343..3176292)
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AA seq
832 aa
AA seq
DB search
MENHEEDEQEELRSTIYTFPPNVQSVIEQVLTSTDPFDQPNFNVVDYINSLFPSEQSLSN
IDEVVNNIQKTIHTIDKDIRSVVRGQTNVGQDGRAALEDAHKVIRQLFVHIKDIKDKAEQ
SEEVVKEITRDIKQLDFAKKNLTASITTLNHLHMLVEGVDNLKILTQKKQYGEIILPLQA
VMEVMQHFNSYMDIPQVKQLSDQVHQIQDELAQQITADFKQAFSGQNPKHFNQLTEGCLV
LSVLHPKVKKDLLVWFVNIQLQEYAHLFDENQDFAWLDKIDRRYAWIKKHLLDFESKFGA
IFPEDWEISERIAVQFCHVTREDLTKLMNKRRNEIDVKLLLYAIQRTSNFETLLTKRFIG
STLETTDAKNAAVSNDVTGKAPGNPFEEEDEKVENEKPTSSVFEKLIGRCFEPYLYIYIE
SLDRNLADLMDKFVSDCKTQPPGAKEFDGIEGPSSVLSSCADLFVFYKKCMLQCTQLSTG
SIMLSLAETFQKYLREYAIKILQNNLPKIGGSAGIGTSMSSITRDFRDLSTSGIIQNFQS
FLKDGESARFSKEEQSRICCILTTAEYCLETTQQLQEKLREKTDECYSEKINLSQEQDIF
HNVISNCIQLLVQDLEAACESAWTAMTKVQWSSVEVVGDQSNYVNTIIAHLRQTIPTIRD
RLSSCRKYFTQLCLKFASSFIAKLIQQLYKCKPLSAVGAEQLLLDVHMLKTALLDLPSTG
YQRKAPVTYTKVVVNGMANAEMILKIVMSPIESPSDFVKQCNIRLPNLQTSEFEKILDMK
GLKKTDQVLLREQFKLSENMNAANATKNREVHNSPEHEAGKIKRLEKLIKRI
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaccacgaggaagacgaacaggaggaactccgctctacgatctacacgttccca
ccgaacgtgcagagcgtgatcgagcaggtgttgaccagcactgatcccttcgatcaaccc
aatttcaacgtggtggactacataaactcgttgttcccctcagaacagtcattgtcaaat
atcgacgaagtggtgaataacatacaaaaaacaatacataccattgataaagatatacgt
tcggtggtacgtggtcagacaaatgtgggtcaagatggtagagcagcgttagaagacgca
cacaaggtgatacggcaattatttgttcatattaaagacataaaagacaaggcagagcag
tctgaggaagtggttaaggaaattaccagagatatcaagcaactggattttgccaagaaa
aatctgactgcctcaataacaactttaaatcatttacacatgcttgtggaaggagtagat
aatttaaaaatattaacacaaaagaaacaatatggagaaattatcttaccattgcaagca
gtgatggaagtaatgcagcattttaatagttacatggatataccacaagtgaaacagttg
tctgatcaagtacatcagattcaggatgagttggcccaacaaattacagcagatttcaaa
caggccttttcaggccagaatccaaagcattttaatcaattaacagaaggatgtttggta
ttatcagtattgcaccctaaagtcaagaaagatctgctcgtctggtttgtaaatattcaa
ttgcaagaatacgcacatttgttcgatgaaaatcaggattttgcctggttggataaaata
gatcgaagatacgcgtggattaagaaacatctgctcgattttgagtcaaaatttggtgcg
atctttcctgaagactgggaaatttccgagcgaatagctgtacaattttgccacgtcaca
cgtgaagatctcacaaaattaatgaataaaagacgtaatgaaatagatgttaagttattg
ctttacgcgattcagaggaccagtaatttcgaaacgttattaacgaaacgttttatcggt
agtactttagagactactgatgctaagaacgcggcagtcagtaatgatgttacgggaaaa
gctccgggaaatcctttcgaggaagaagatgaaaaagttgaaaacgaaaagccgacatcg
tctgtatttgaaaaattaataggaagatgtttcgagccatatttatatatttatatagaa
agcttagatcgtaatttggcagatctgatggataagttcgtgtctgattgtaaaacgcaa
ccgccaggtgctaaggaatttgacggtattgaaggccctagtagtgtcttgagctcatgt
gcagatctgtttgtattttacaaaaagtgtatgttgcaatgtacgcaactcagtactggt
tcaattatgctgagccttgccgagacttttcagaaatacctacgggaatatgcaattaaa
atcttgcagaataatttacctaaaattggaggtagtgcaggaatcggtaccagtatgagt
agtattacacgtgattttcgagatttatcaacatcgggcatcattcaaaattttcaaagt
tttttaaaagatggagaatccgctagatttagcaaagaggagcaatctcgtatatgttgt
attttgacaactgcagaatattgtttagaaactacacaacaattgcaagagaaacttcgc
gagaagacggacgaatgttattctgaaaaaattaatttatctcaagaacaagatatcttt
cataacgtaatttccaattgtattcagttgttagttcaagatttagaagcagcatgtgaa
tctgcatggactgcaatgactaaggtgcaatggagttcagtagaagttgtaggcgatcaa
agtaattacgttaatacgataatagcgcatcttcgacaaacaataccaaccatacgagat
agactctcttcttgtagaaaatattttacacagctttgtctcaagttcgctagctctttc
atagcaaaattaatacagcaattatataaatgtaaaccgttaagtgctgtcggcgcagag
caattgttattagatgtccatatgttaaaaacggctttgttggatcttccttcaacgggt
taccaaagaaaagctccagtaacatatactaaagttgtagtcaatggtatggcaaatgct
gaaatgatattaaaaattgtgatgtccccaattgaatctcccagcgacttcgtaaaacag
tgcaatatacgtttaccgaatttacaaacttcagaatttgaaaaaattctagatatgaag
ggattaaaaaagacagatcaagttctattacgtgagcaatttaaactatctgaaaacatg
aacgctgcaaatgctacgaaaaatcgtgaagtacataatagtccggaacacgaagctgga
aaaattaaaaggcttgagaagcttattaaacgaatttaa
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