Cardiocondyla obscurior: 139103790
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Entry
139103790 CDS
T10704
Symbol
Para
Name
(RefSeq) sodium voltage-gated channel paralytic isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
cobs Cardiocondyla obscurior
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cobs04040
]
139103790 (Para)
Ion channels [BR:
cobs04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
139103790 (Para)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
GPHH
EF-hand_6
SieB
Motif
Other DBs
NCBI-GeneID:
139103790
NCBI-ProteinID:
XP_070514879
LinkDB
All DBs
Position
LG07:complement(291247..331906)
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AA seq
2147 aa
AA seq
DB search
MCLETLFPACLILCISCRMSMSWCNTVFLPLFSAIYPFNLSLFLFLSSFLKTSFQFLLFQ
KLCEANPRTDLTTPVPLLSHIDIYIYIYNFFFNNFVHSSIFPVFFVSLCVTTVSPFLQFQ
GGFGRKKKKKEVRYDDEDEDEGPQPDPMFEQGGPLPVRMHNDFPPELASTPLEDIDSYYH
NQRTFVVISKGKDIFRFSATKAMWMLDPFNPIRRVAIYILVHQLFSLFIITTILVNCILM
IMSTTPTIESTEVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFIVIALAYVTMG
IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGL
QIYMGVLTQKCIKNFPEDGSWGNLTDESWFRFVSNESNWYEEEGKGIVLCGNSSGAGQCL
PGYTCLQGFGPNPNYGYTSFDTFGWALLSAFRLMTQDFWENLYQLVLRSAGPWHMLFFIV
IIFLGSFYLVNLILAIVAMSYDELQKKAEEEEAAEEEAIREAEEAALAKENKLAAREAAA
AAAAAAAVAAAEAADQIVKSPSDFSCHSYELFVGQEKGNDDNNKEKMSIRSIESVGEQRH
IKQINNHSAANKVRKVSAVPRAANGQFTYAYQESLRKASLSLPGSPFNLRRSSRGSHQFT
IRNGRGRCFVPPGGDRKPLVLSTYLDAQEHLPYADDSNAVTPMSEENGTIVVPVYYANLG
SRHSSYTSHASRLSYTSHGDLAFPGIRGIDSIGKPITKQEQILRNRNNKQTTPANGHVTD
TNQKTYHFETSEEDPMGKTKQQDNPFIEPSQQHTVVDMKDVMVLNDIIEQAAGRQSQTPD
QGVSTYYFPTDDDEEPTFKDKLLAGMFRCIDIFCVWDCCWLWLEFQKYVSLLVFDPFVEL
FITLCIVVNTLFMALDHHDMDKDMERVLKSGNYFFTATFGIEATLKLMAMSPKYYFQEGW
NIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTVGALGN
LTFVLCIIIFIFAVMGMQLFGKNYTDHVDYFPDGELPRWNFTDFMHSFMIVFRVLCGEWI
ESMWDCMLVGDVSCIPFFLATVVIGNLVVLNLFLALLLSNFGSSNLSAPTADNDTNKIAE
AIDRIARFIKWIKRNIFAFAKLMRAKLTNQISDQAPGEGPSNSWKEDGIDRDGDLDLADG
ELDAYRDKKSVKELNQLEVAIGDGMEFTIHGDLKNKLKRSKLCMNNTKVIANSINHHDYR
LDNDYINQNEDDTISNKSYGSHKNRAFKDESHKGSMDSLNGEEKKDASKEDLEQEEEDLE
DEGEGEEGDEIGDGEIIIADEDPLQSSYPADCCPENCYKKFPFLAGDDDAPFWQGWANLR
YKTFKLIENKYFETAVITMILLSSLALALEDVHLQQRPVLQDVLYYMDRIFTVIFFIEML
IKWLALGFKKYFTNAWCWLDFIIVMVSLINFVASLCGAGGIQAFKTMRTLRALRPLRAMS
RMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKYFKCVDANKTTLSHEI
IPDRNACNAENYTWENSPMNFDHVGKAYLCLFQVATFKGWIQIMNDAIDSREVDKQPIRE
TNIYMYFYFVFFIIFGSFFTLNLFIGVIIDNFNEQKKKAGGSLEMFMTEDQKKYYNAMKK
MGNKKPLKAIPRPRWRPQAIVFEIVTDKKFDMIIMLFIGLNMLTMTLDHYQQSQTFSDVL
DYLNMIFIVIFTSECLMKIFALRYHYFKEPWNLFDFVVVILSILGLVLSDIIEKYFVSPT
LLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFFM
HVKDKSGLDDVYNFKTFGQSMILLFQMSTSAGWDGVLDGIINEEDCQEPNNEIGYPGNCG
SSTIGIAYLLSYLVISFLIVINMYIAVILENYSQATEDVQEGLTDDDYDMYYEIWQQFDP
DGTQYIRYDQLSDFLDVLEPPLQIHKPNKYKIVSMDIPICKGDLMFCVDILDALTKDFFA
RKGNPIEETGDLAEVQTRPDEVGYEPVSSTLWRQREEYCARLIQNAWRKHKQQRLGGPSE
ESDDPDTDLCARQTKVLVESDGYVTKNGHRVVIHSRSPSVTSRTADV
NT seq
6444 nt
NT seq
+upstream
nt +downstream
nt
atgtgcttagaaaccctctttccggcttgcctgatcctctgtatttcctgtcgtatgtct
atgtcgtggtgtaacactgtgtttcttccccttttctctgcaatctacccctttaatctc
tctctctttctttttttgtctagttttctgaaaacttcgttccagttcttacttttccaa
aagctctgcgaggctaatccccggactgatcttaccacccccgtccccttgttatcgcat
attgacatatatatatatatatataattttttttttaataactttgttcattcatcgata
tttcccgtattctttgtatctctgtgtgtaacaactgtttctccatttctccaatttcag
ggaggttttggacggaagaaaaagaaaaaagaagtacgatatgacgacgaggacgaggac
gaaggtcctcaaccggatccaatgtttgagcaaggaggaccgctcccggtccgaatgcac
aacgattttccacccgagttggcctccacacctctcgaggatattgatagctactaccac
aatcaaaggaccttcgttgtcattagcaaggggaaggatatattcagattctcagcgacg
aaagcgatgtggatgctcgacccgttcaaccctatacggcgcgtggccatatatatattg
gttcaccagctcttttccctcttcatcatcaccacaatattggttaactgtatactcatg
atcatgtccaccacgcccaccatcgagtccaccgaagtgatatttacgggcatctacaca
tttgagtccgccgttaaggtgatggcgaggggtttcattctgcagccttttacctatctt
agagatgcatggaattggctcgacttcatagttatagctttagcttatgtgacgatgggc
atagatctaggcaaccttgccgctctcaggacatttcgagtccttcgagccttgaagact
gtcgctattgtaccaggtctgaaaaccattgtcggcgctgtgatagaatccgtgaagaac
ctgcgcgatgtgataatcctgacgatgttctccctctccgtctttgcgctgatgggtctt
cagatttatatgggagtcctcacgcaaaaatgtataaagaactttcctgaggatggctcc
tggggtaatctcaccgacgagagttggtttcgattcgttagtaacgaaagtaattggtac
gaagaagagggtaaaggtatagtcttatgcggaaattcatcaggggcggggcaatgtctt
cccggatacacgtgtttgcaaggattcggccctaatccgaattacggttacacgagcttc
gacactttcggttgggcattgctctctgcctttcgtctcatgactcaggatttttgggag
aatctgtatcaactggtgctaagatcggctggcccgtggcacatgctcttcttcattgtc
atcatctttctcggctccttttatctagtcaacttgatcctcgctattgtcgcgatgtcg
tacgatgaattgcaaaagaaagcggaagaagaagaggctgcagaggaggaagctataagg
gaagctgaggaagctgcattggcgaaagagaacaagctcgcagcgcgagaagctgcggct
gcggcagcggccgcagcggctgtcgccgccgcggaggctgcggatcagatcgtcaaatcg
ccatcggacttctcgtgccacagttacgagctatttgtcggccaggagaaaggcaacgac
gataacaacaaggagaagatgagcatacgttccattgaatccgtcggtgaacagaggcac
attaaacagatcaacaatcacagcgctgccaataaagtgcggaaagtcagcgccgtccct
cgcgccgctaatggccagtttacttatgcctaccaggaaagcctgcggaaggccagcctg
agcctacctggctcaccgttcaatctacgtcgcagcagccgtggaagccaccaattcacg
atacgtaacggccgcggccgatgcttcgtaccaccgggcggcgaccggaagcccctcgtg
ctgtcgacgtacttggacgctcaggaacacctaccttacgccgacgactcgaacgcggtc
accccgatgtctgaggagaacggcacgatcgtggtgcccgtttactacgcgaatctcggc
tcgcgccactcctcctacacctcgcacgcctcgcgactctcctacacatctcacggtgac
ctggcttttcccggcatccgcggcatcgacagcatcggcaaaccgattaccaagcaggag
cagatcttaaggaatagaaacaacaagcagactacgccggccaacggccacgttacggat
accaatcagaaaacttatcatttcgaaacctcagaagaagatcccatgggcaagaccaag
caacaagacaatccgtttattgaaccgtctcaacagcataccgtggtcgatatgaaagac
gtgatggtgctgaacgacataatcgaacaagccgctggtcgtcagagccaaacaccggat
caaggagtttcgacctattactttccgacagacgacgatgaagaacctacgttcaaggac
aagttattggccggaatgtttcgttgtatcgacatcttttgcgtctgggattgctgttgg
ctttggctcgagtttcaaaagtacgtgtccctgttggtctttgatccattcgtagagctc
tttatcacactttgcattgtcgtcaatacgctcttcatggccctggatcaccacgatatg
gacaaagatatggaaagagtactcaagtccggcaattacttcttcacggcgacgttcggt
atcgaagcgactctgaaactgatggcgatgagcccaaaatattattttcaagagggctgg
aatattttcgattttattatcgtcgctctttcgcttttggagttgggtctcgagggcgta
caaggtttatcggtattgcgatctttcagattgttgagagtgtttaagctggctaaatcg
tggcctacattgaatctgctaatctctatcatgggtagaacggtgggcgcgttgggtaat
ctaacgttcgtcttgtgtatcatcatcttcatctttgccgtgatgggtatgcagctattc
ggcaagaactataccgatcacgtcgactacttccccgacggtgaattgcccaggtggaat
tttaccgacttcatgcactcttttatgatcgtttttcgagtattgtgcggagaatggatc
gagtctatgtgggattgcatgctagtcggtgacgtttcctgcataccattcttcctggcc
accgtagtcatcggtaacttggtcgtcctgaatctcttcttagctctgttgctcagcaac
tttggctcatcgaacctatcggccccgactgcggacaacgacacgaacaaaattgcggag
gcgatcgaccgaatagcgcgtttcattaagtggatcaagcgaaacatctttgcatttgct
aagttgatgcgagccaaactcaccaatcagatatccgatcaggcgccaggtgagggaccg
tccaacagttggaaagaagatgggattgatcgtgatggggacctagatcttgcagatgga
gaattggacgcatacagagacaagaagagcgttaaagaactgaatcagcttgaagttgcc
attggcgacgggatggaatttactattcatggggatttgaagaacaaactaaaaagaagc
aagctgtgcatgaacaatacaaaggttatagcgaattcgataaatcatcacgattataga
ttggacaacgattacattaatcagaatgaagacgatactatcagtaacaaatcgtacggt
agtcacaaaaaccgcgcatttaaagacgagagtcataagggcagtatggattctttaaat
ggcgaagagaaaaaagatgcgagcaaagaagatttagaacaggaagaagaagatctagaa
gacgaaggtgaaggcgaagaaggggatgaaataggcgacggcgagataataatcgcggat
gaagatccccttcagtcgagttacccggccgactgctgtccagaaaattgctacaaaaag
ttcccatttctggcgggcgacgacgacgctccgttttggcaaggctgggcgaacttaaga
tataaaaccttcaagttgatcgagaacaaatacttcgagactgccgttattactatgatt
cttctgagtagcttggccttggctttggaggacgttcatcttcaacaacgacctgttctg
caggacgtattgtattacatggaccgaatattcactgtgatcttcttcatcgagatgttg
atcaagtggctggctctaggatttaaaaaatatttcacgaacgcctggtgctggctcgat
tttatcatcgtcatggtatcgctcattaacttcgtagcgtcgctctgtggcgctggcggg
attcaagccttcaaaacaatgcggaccctaagggccctaaggccgctaagggcgatgtct
agaatgcaggggatgcgggtagtcgttaatgccttggtccaagccattccatccatcttc
aacgtattgctggtatgccttattttctggcttatattcgctatcatgggagtgcaactg
ttcgctggcaaatattttaagtgtgtcgatgcgaacaagacgacgcttagccacgaaata
ataccggatcgtaacgcctgcaacgccgagaattacacatgggaaaactcgccgatgaac
ttcgaccacgtcgggaaagcgtatctgtgcctatttcaagtggcgacttttaagggatgg
atccaaattatgaatgatgcgatcgactctagagaggtagacaaacagccgattcgcgag
acgaacatttacatgtatttctacttcgtatttttcattatattcggatcgttttttacc
ctcaatctgttcatcggagttatcatcgacaactttaacgagcaaaagaagaaggccggc
ggatccctcgaaatgtttatgacggaagatcagaagaaatattacaacgccatgaaaaaa
atgggcaataagaagcctctgaaagccattcctcggccgaggtggcggccgcaggccata
gtgtttgaaatagtgacggacaaaaagttcgatatgataatcatgctgttcatcgggctg
aatatgctcacgatgacattggaccattatcagcagagccaaacgttcagcgatgttctg
gactatctcaacatgatattcattgtgatattcaccagcgagtgtctcatgaagatcttc
gctcttcgctaccactatttcaaggagccatggaacctctttgattttgttgttgttata
ttgtcaatattaggtctggtgctcagcgacattatcgagaaatatttcgtgtcaccgact
ttgcttcgtgtagtaagagtggcaaaagtcggtcgtgtgcttcgactcgtgaaaggtgcc
aagggtatccgaacccttctcttcgccctggcgatgtcgttgccagccctcttcaacatt
tgcctactgttgtttttggtgatgtttatctttgcgatattcgggatgtctttcttcatg
cacgtcaaagacaagagcggactggacgacgtgtacaatttcaagacatttgggcagtca
atgatactgctatttcagatgtcaacctcggccggatgggacggtgttctcgacggtata
ataaacgaggaagactgccaggagccgaacaacgagatcggctacccgggcaactgcgga
tcctcgacgatcgggatcgcctacttgctctcgtaccttgtgatcagctttttgatcgtc
atcaacatgtacatcgccgtgattctcgagaattactcgcaagctaccgaggacgtgcaa
gagggtctaacggacgacgactacgatatgtactacgagatctggcaacagttcgatccg
gacggcacgcaatacatcagatatgaccaactgtcggatttcttagacgtgttggagccc
ccgttgcagatacataagcccaataaatacaagattgtgtcgatggatatccctatatgt
aagggagaccttatgttttgtgtggacatcctcgacgctctcactaaggactttttcgca
cggaagggcaatccgatcgaagagacgggcgacctcgccgaggtccagactcggcccgac
gaggtcggttacgagccggtctcgtctaccttgtggcggcaacgcgaagaatactgcgcc
cgtctaatacaaaacgcctggcggaaacacaagcagcaacgtcttggcgggccaagcgag
gagagcgacgatccggacaccgacctgtgtgcccggcagaccaaggtgctcgtcgagagc
gacggctacgtcacgaagaacggtcaccgcgtcgtcatacacagccgttcgccgagcgtt
acttcgagaaccgcggacgtctga
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integrated database retrieval system
