Cardiocondyla obscurior: 139104917
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Entry
139104917 CDS
T10704
Symbol
Tfb5
Name
(RefSeq) general transcription factor IIH subunit 5
KO
K10845
TFIIH basal transcription factor complex TTD-A subunit
Organism
cobs Cardiocondyla obscurior
Pathway
cobs03022
Basal transcription factors
cobs03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
139104917 (Tfb5)
09124 Replication and repair
03420 Nucleotide excision repair
139104917 (Tfb5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cobs03021
]
139104917 (Tfb5)
03400 DNA repair and recombination proteins [BR:
cobs03400
]
139104917 (Tfb5)
Transcription machinery [BR:
cobs03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
139104917 (Tfb5)
DNA repair and recombination proteins [BR:
cobs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
139104917 (Tfb5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb5
RRF_GI
Npun_R1517
Motif
Other DBs
NCBI-GeneID:
139104917
NCBI-ProteinID:
XP_070516793
LinkDB
All DBs
Position
LG08:complement(5290819..5292153)
Genome browser
AA seq
73 aa
AA seq
DB search
MVNVTKGILVECDAAMKQFLLHLDETSALGRKFIIQDLDERHLFISADILETLQAKVDDL
MDQISFPLAEKGV
NT seq
222 nt
NT seq
+upstream
nt +downstream
nt
atggtaaatgtgacaaaaggaattttagttgagtgtgatgcagctatgaaacaatttctt
ctacatttggatgaaacatctgcactaggaagaaaattcataattcaagatctggatgag
agacatttattcatatctgcggacatattggaaactttgcaagcaaaagtggatgattta
atggatcagatatcattcccactggcagaaaaaggagtttaa
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