Cardiocondyla obscurior: 139106328
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Entry
139106328 CDS
T10704
Name
(RefSeq) E3 ubiquitin-protein ligase LRSAM1 isoform X1
KO
K10641
E3 ubiquitin-protein ligase LRSAM1 [EC:
2.3.2.27
]
Organism
cobs Cardiocondyla obscurior
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cobs04131
]
139106328
04121 Ubiquitin system [BR:
cobs04121
]
139106328
Enzymes [BR:
cobs01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139106328
Membrane trafficking [BR:
cobs04131
]
Autophagy
Xenophagy
Other xenophagy associated proteins
139106328
Ubiquitin system [BR:
cobs04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
139106328
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_14
zf-C3HC4_3
LRR_8
LRR_4
Prok-RING_4
ACT_4
LRR_13
zf-RING_2
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
139106328
NCBI-ProteinID:
XP_070519129
LinkDB
All DBs
Position
LG01:2734600..2739645
Genome browser
AA seq
712 aa
AA seq
DB search
MSRKHGSKSDVDYKARLEYKLYLARENPEPVFDVSECALKNVPSGIYSLCKVFRKKILLI
YDNKLSSLSGGGALSDLSLLTVLDIHRNEFTALPADIKYLSSLKELYLQDNNIRKLPNEI
VSLNKLTILNVSRNNLKQLPDGIGQLQQLNTLDISHNKPLHKLPKSLGYAQQLTNLNIEG
LDLSYPCQDILDGGTIVIVAFLANESGIEYSPESSVSETDITMDTSSEDMQTVYHNKSND
VQAALQKLNEIKACWTLLQEHRQNALLEVEKNIKQQQEYEIEVQSMLKAHRKKLLEDVAL
QQVQLEQELEKVQQERDTNRSRLLSYIYNAEREADNVIKEFLRNSEEERQSQAELVEREK
QEEMQLLSSCHSEQFMLRTKDTLYAMEKLLEEEMCRARKWEEHTKNRDYTVQSLLTLEVR
NNDHLAQIMHDQEKSRQDLVDRLRQDEVLQKAAVAALLERSDTRSWSIIQQMNLVQSQLA
ALTNIELERRKLEINQQLNEIADKRVTLTAILIDLLEQQKNRRDQLLETINTIEQQRCIS
NMRRGSLFWLMQYQSLMEARPQGLLEMLEPTLVRHVAIAGALHCLPFLATLPSLLPNISD
EQLKNIGINCENDRAAIMLAVENYLAEIKMSDFRSPITASAPFEEASTSDQDYNSIQNVN
MIECVICLDLQCEVIFLPCGHFCCCSACAEKVPAECPMCRSSIERKVRVVQP
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggaagcacgggagcaagagcgacgtcgactacaaggcgcggctcgaatacaag
ctctacttggccagggaaaatccagagccagtgtttgatgtatcggaatgtgccttgaag
aatgtgccgtcgggtatctattcgctttgtaaggtgttccgaaagaagatcttgctaatt
tatgataacaaactaagctcactatcgggtggtggtgccttaagtgacttgtccttattg
actgtcttagacattcacagaaacgagtttactgcattgcctgctgacattaagtatctc
tcttctctaaaggagctttatttgcaagataacaacattcgcaaactacccaacgagata
gtgtccttgaataaattaacgattttgaatgtctcgagaaataatctgaaacagctgccc
gatggcattggccaactgcagcagctcaacactctcgacattagccacaataaaccttta
cataagctgcccaaatctctgggctacgcacaacaattaacaaatttaaatattgaagga
ttagatctatcgtatccatgccaggacattttagacggcggtacgattgtaattgttgca
tttttggcaaacgaaagtggtatcgagtactcaccggagagctcggtttcagaaaccgat
ataacaatggatacgagctcggaagatatgcagacagtataccataataagagtaacgac
gtacaggcagcattacagaagctaaacgaaataaaggcatgttggacgcttcttcaagag
catcggcaaaatgctttgttagaagtagaaaaaaatataaagcaacaacaggaatacgaa
atagaagtacaatccatgcttaaggctcacagaaagaagcttttggaggatgtagcatta
cagcaggtacaattagagcaagaactcgaaaaagttcagcaagaaagggatacaaataga
tcacgtttactctcctatatttataatgcggaaagagaagctgataatgtaattaaagaa
tttctgagaaatagcgaggaagaaagacaaagtcaagctgaattagtagagcgagagaag
caggaagagatgcaactactaagctcctgccactcggaacaattcatgttacgcacgaaa
gatactctttatgcaatggaaaaattattggaagaagaaatgtgccgagcaagaaaatgg
gaagagcataccaaaaatagagattacaccgtacaatctttgcttacgctggaggtgaga
aacaacgaccatttggcgcagataatgcatgatcaagaaaaaagtaggcaagatcttgtt
gatagattacgacaggacgaagtgttgcagaaagcggcggtagccgcgttattagaacga
agcgatacgcgttcttggagcattattcaacaaatgaatttagtgcagtcgcaattggct
gcgcttactaatattgaactcgaaagaaggaagttggagattaatcagcaacttaatgaa
attgctgataaacgcgtgaccttaacagccattttaatcgatttattggaacaacaaaaa
aacagaagagatcaactactagaaacgatcaatacgatagaacaacaacgatgcatttcc
aacatgagacgcggcagtttgttctggctgatgcaatatcaatctttgatggaagctcga
ccacaaggactattagagatgttggaacctactttagttcgacatgtggcgatagcagga
gctttacactgccttccattcttggctactttgccgtctttattaccgaacattagcgac
gaacagttaaaaaatattggcataaattgtgagaatgatcgtgctgccataatgctagct
gttgaaaattatctggcagaaattaaaatgagtgatttcagatcgcctataacagcttct
gcgcctttcgaagaagcatcgactagcgatcaagattacaattcgattcaaaatgtcaat
atgatagaatgtgtaatttgcctcgacttgcagtgcgaagtgatttttctaccttgtgga
cacttctgctgctgctccgcttgcgcggaaaaagttcctgcagaatgtccaatgtgtcgg
agttcaatagaacgcaaagttcgagttgtgcagccttaa
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