Cardiocondyla obscurior: 139107453
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Entry
139107453 CDS
T10704
Symbol
Trpgamma
Name
(RefSeq) transient receptor potential-gamma protein isoform X1
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
cobs Cardiocondyla obscurior
Pathway
cobs04745
Phototransduction - fly
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09150 Organismal Systems
09157 Sensory system
04745 Phototransduction - fly
139107453 (Trpgamma)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cobs04040
]
139107453 (Trpgamma)
Ion channels [BR:
cobs04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
139107453 (Trpgamma)
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
PKD_channel
Ank
Ank_3
Ank_4
Ank_5
Holin_BhlA
Motif
Other DBs
NCBI-GeneID:
139107453
NCBI-ProteinID:
XP_070521164
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All DBs
Position
LG13:2443663..2507444
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AA seq
1291 aa
AA seq
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MLHNHEMNFELVGRIIRHRWESGFTQFLAGGDHDRNIPEIETTYEDEEHFARGSRTPGED
IVGEEDDGQGRSSTNNFPLRMASDTTRGRITSVAGSFLRGSAGQHVNFDPEAPPLPQAHM
VQTTSLLERPEIDKKVKRHSIHGMMEEENVVRPHQEMASLSLQEKKYLLAVERGDVASVR
RMLQKAHEADININCVDPLGRSALLMAIDNENLEMVELLIEHKVDTKDALLHAISEEFVE
AVEVLLEHEETLHKNGDPHVNSWEALPPDTATFTPDITPLILSAHRDNYEIIKILLDRGS
TLPMPHDVRCGCDECVTSRMEDSLRHSRSRINAYRALASPSLIALSSKDPILTAFELSWE
LRRLSFLEHEFKCEYQELRRQCQDFATALLDHTRSSYELEVLLNHDPTGPAFEHGERMHL
NRLKLAIKLRQKKFVAHPNVQQLLASIWYEGLPGFRRKNMFLQALEIVRIGVLFPFFSVG
YIIAPHSMVGQTMRKPFIKFICHSASYFTFLFMLILASQRIESVIGNWMGHEVDEHEPAP
TKRGAAPTIVEWFILAWVSGLIWSEVKQLWDVGLEEYVNDMWNVIDFVTNSLYVATVALR
VVAYYRVQKENENQAPGSVIPALQREEWDTWDPMLISEGLFSAANIFSSLKLVYIFSVNP
HLGPLQVSLSRMVMDIMKFFFLYVLVLFAFSCGLNQLLWYYADMEKKQCPSAMPFSANVS
TTNADPNACTVWRRFANLFETIQTLFWAVFGLVDLDSFELDGIKVFTRFWGMLMFGTYSV
INIVVLLNLLIAMMNHSYQLISERADIEWKFARSKLWISYFEEGGTAPPPFNIIPTPKSA
WYVARWVYRKLCGHSRAAKKEHMRTIRRKVKQASERDFRYQSIMRNLVRRYVTVEQRKAE
GEGVTEDDVNEIKQDISAFRCELIEILKNSGMNTSTAASSGTDGSLKELSVGAGGKKNRQ
KERRLMKGFNIGPQPGGSGTLPPVAEFIASLQQAQHENSHHDLFGSTLSGIFGPGTTPKK
SPHHTSTNSVPGLASGSRQSHTTRSSSRKKRWGTLIEAAKAGRVSRLIGRSRSEDSVYSP
ASEDGGSRSEGSSDSKSSLEGASHDVQSVQHPSHHHSHSHHAHHHETHHMFTHGLGPALA
ALRKKRKKFSASRSSTPAMTSSTNTNPADSSTTSSVATVLAARISSKKQLQRASSVPTRG
PELTAQSSLTSSRRHEVTQSQQPSLDVAEINERMNVQQDVIVPLTPSTTEESMVASGSTS
ITAKRNGSATQLQRLPGIEPISGHDVFSGWL
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
atgctacacaaccacgagatgaatttcgaattggttggcaggattattagacatcgatgg
gaatcaggtttcactcagtttttagccgggggcgatcatgacaggaacataccggagatc
gaaaccacgtacgaagatgaggagcatttcgccaggggcagcagaacccctggtgaagat
attgtcggtgaagaagacgacggtcaaggcagaagtagcacgaacaactttcccttgaga
atggcgtccgacacaacgaggggtcgaatcactagcgttgccggcagcttcctgcgaggc
tccgccgggcagcacgtgaacttcgaccccgaggcgcctccactgccgcaggcacatatg
gtacagacgaccagtctgctggaacggccggaaattgacaagaaagtcaagaggcatagc
atacacggcatgatggaggaagaaaacgtcgtgagacctcatcaggaaatggccagcctg
tcgcttcaagagaagaaatatcttctcgccgtcgagcgaggagacgtggcttccgttaga
agaatgctccaaaaagcccacgaggccgacattaacattaactgtgtggatcctctcgga
cgatcagccctcctcatggcaatcgataatgaaaatctagagatggtcgagcttttaata
gagcacaaggtcgatacgaaggatgctctccttcacgctatctccgaggaattcgtcgag
gcagtcgaagtccttctagagcatgaggagacccttcataaaaatggcgacccacatgta
aatagctgggaggctttacctcctgatacggccacgttcacgcccgacatcacaccgttg
atcctgtcggcccacagagacaactacgaaattataaagatccttctggatcgtggatcc
actctgccgatgccgcacgacgttcgctgcggatgcgacgaatgcgtaacatcacgaatg
gaagattccctgaggcattcgaggagccgaataaacgcctatcgggcgttggcgtcgccg
tccttgatagcactgtcgtctaaggatcccattctgactgcgttcgagctctcatgggaa
cttcgacgactctcgttcttggaacacgaattcaagtgcgagtatcaggaactccgaaga
cagtgccaagattttgcgaccgcattgctggaccacactagaagttcctacgagctcgaa
gtcttgctgaatcacgacccaacgggaccagcttttgagcatggagagcggatgcacctc
aaccgcttaaaattggccattaagctgagacaaaaaaagttcgtggcgcatcctaacgtg
cagcagctactggcatcgatttggtacgagggcttgccggggtttcgaaggaagaacatg
ttcctccaggcgcttgagatcgtcaggattggcgttctctttccatttttcagcgtagga
tacatcatcgcgcctcacagtatggtcggccaaacgatgaggaagccgtttatcaagttc
atctgccattccgcgtcgtatttcacttttctattcatgttaattctggctagtcagcgg
atagagagcgtgatcggtaattggatggggcacgaagtcgacgagcacgaaccagccccg
acgaaaagaggtgccgcgccaacgatcgtggaatggttcatattggcttgggtgtcggga
ctgatttggtcggaggtgaaacaattgtgggacgtgggtctggaggagtacgtgaacgat
atgtggaacgtgatcgacttcgtaacgaactcgctgtacgtagccacggtggccctcagg
gttgtggcttactacagggtgcaaaaggagaacgagaaccaggcaccgggatcagtgatc
ccagcacttcagcgtgaagagtgggacacttgggacccgatgctcatctccgagggtctc
ttctccgccgccaacatcttcagttcgctaaagctcgtctacatattctcggtgaatcct
catctcggcccgctgcaagtttccctgtcgaggatggtcatggacattatgaaattcttc
ttcctctacgtgctggtactcttcgccttctcgtgcggactcaaccaacttctctggtat
tacgcggacatggagaaaaagcaatgtccatcggcgatgccgttttcggccaatgttagc
accactaatgctgacccgaatgcgtgcaccgtttggcggcgattcgcaaatttgttcgag
accatacaaacgctcttctgggcggttttcggcctggtggacctcgacagtttcgaactg
gacggcatcaaggtgtttaccagattctggggcatgctgatgttcggtacttactcggtt
attaacatcgtcgttcttctaaatctcctgatcgctatgatgaatcattcctatcaacta
atctcggaacgcgccgacatcgagtggaagttcgcgaggagcaaactctggatcagctat
ttcgaggagggcggcaccgctccgccgccgttcaacatcataccgaccccgaaaagcgcc
tggtacgtcgcacgatgggtgtatcggaagctctgcggacacagcagggcggccaagaag
gagcacatgcgaacaatcaggcgaaaagtgaagcaggcttccgagcgggacttcaggtat
caaagtatcatgagaaatttggtaagacgatacgtcaccgtcgagcaacgtaaggccgaa
ggcgagggtgtcacggaagacgacgtgaacgaaatcaagcaggacatcagtgcatttcgc
tgcgagcttatcgagatactgaagaactccggcatgaatacctctaccgcggcgagcagc
ggtaccgacggtagccttaaagagctgtccgtaggtgcgggtggcaagaaaaaccgccag
aaagagcggcggttaatgaagggtttcaacattgggccacaaccgggcggaagtggtacc
ctgccgcccgtggcggaattcatcgcatcccttcagcaagcacagcacgagaattcccat
catgacttatttggctcaaccttgagcggcatattcggtccgggaacgacaccaaagaag
agcccacaccataccagcactaatagcgtgcctgggctagccagtggatcgcgacaaagc
cacaccactcgaagtagctcccggaagaaacgttggggcactttaattgaagctgcaaaa
gccggaagggtctctagattgatcggtagatctcgatcggaggactcggtgtactctccg
gcgtccgaggacggcggctcgagatccgagggttcctcggactcgaagtcttccttggag
ggtgccagccacgatgtacaaagcgtgcagcatccctcgcatcatcactcgcattctcat
cacgcgcatcatcacgagacgcaccacatgtttacccacggcttgggcccggctttggcc
gctctgagaaagaagcgcaagaagttctccgcctcgagatcgtccacgcccgcgatgacc
agcagcaccaacacgaacccggcagattcgagcacgacgtcatcggttgccactgtcctt
gcggccagaatctcctcgaagaagcagctgcaacgtgccagtagcgttccgacccgcggt
cccgaattaacggcacagtcatcgctaacgtcatcgcggcgacacgaagtgacgcaaagc
cagcagcccagcctcgacgtcgccgagatcaacgagcgtatgaacgtgcagcaagatgtt
atcgttccattgacaccgtcgacaaccgaagagagcatggtggcgagcggctcgacgtcg
attacggcaaagcgaaacggatcggcgacgcaactgcaacgtcttcccggcatcgagccg
atttccggccacgacgtgttctccggttggctctga
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