Cardiocondyla obscurior: 139107533 Help Entry 139107533         CDS       T10704                                  Symbol Prp19 Name (RefSeq) pre-mRNA-processing factor 19   KO K10599   pre-mRNA-processing factor 19 [EC:2.3.2.27] Organism cobs  Cardiocondyla obscurior Pathway cobs03040   Spliceosome cobs04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:cobs00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     139107533 (Prp19)   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     139107533 (Prp19)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:cobs03041]     139107533 (Prp19)    04121 Ubiquitin system [BR:cobs04121]     139107533 (Prp19)    03400 DNA repair and recombination proteins [BR:cobs03400]     139107533 (Prp19) Enzymes [BR:cobs01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      139107533 (Prp19) Spliceosome [BR:cobs03041]  Complex B   Other components    Prp19 complex     139107533 (Prp19)  Complex C    Prp19-CDC5 complex     139107533 (Prp19) Ubiquitin system [BR:cobs04121]  Ubiquitin ligases (E3)   U-box type E3    139107533 (Prp19) DNA repair and recombination proteins [BR:cobs03400]  Eukaryotic type   Other factors with a suspected DNA repair function    PSO4 complex     139107533 (Prp19) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  WD40_Prp19 Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40 WD40_WDHD1_1st Beta-prop_EML_2 Prp19 Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_WDR3_2nd WD40_CDC20-Fz WD40_Gbeta Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_Aladin Beta-prop_TEP1_C ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_WDR19_1st WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_Vps41 NBCH_WD40 Beta-prop_HPS5 Beta-prop_RIG_2nd Beta-prop_IFT122_1st Beta-prop_WDR41 eIF2A U-box Beta-prop_DCAF4 Tricorn_2nd B-prop_COPA_B_2nd Beta-prop_ACSF4 PAS_11 RMC1_N Cytochrom_D1 WDR54 Motif Other DBs NCBI-GeneID:  139107533 NCBI-ProteinID:  XP_070521317 LinkDB All DBs Position LG13:complement(1569729..1572861) Genome browser AA seq 504 aa AA seqDB search MALSCAISNEVPEHPVISPVSGSIFEKRLIEKYVTENGVDPINGEELTIDQLIDVKATPI VKPKPPSATSIPAILKIMQDEWDAVMLHSFTLRQQLQTARQELSHALYQHDAACRVIARL NKEVTAAREALATLKPQAGIVQATTIPQPAVAVEAGGTAAQPMEQAGITEDVIQKLQERA TVLTQERKRRGRSVPEDLMPQDSIRSFQTLASHPGLHSASVPGILALDIHSADTSKILTG GADKNATVFNKDTEQVVAILKGHTKKVTRVIYHPEEDVVMTASPDTTIRVWNVGTSQTTL LLKAHDAPVTGLSLHPTGDYLLSSSLDQHWAFSDIRTGRLLTKIAGQAGQPLTTAQFHPD GLIFGTGTADSQVKIWDLKEQSNVANFPGHTGPITAISFSENGYYLATAAEDSCVKLWDL RKLKNFKTLQLEESYEVKDICFDQSGTYLAVAGTDVRVYLCKQWQELKVLNDHTAAATGV RFGKHAQYIASTSMDRTLKLYGLS NT seq 1515 nt NT seq  +upstreamnt  +downstreamnt atggcgttatcttgcgcgatttctaacgaggtaccagagcatccagtgatatctccggtc tccggatcaatttttgagaaacgtttaatagaaaagtatgtaaccgaaaatggagtagat ccaattaacggcgaagaacttactattgatcaacttatcgatgtaaaagcaactccaatc gtcaaacccaagccgcctagcgccacttctattccggcaatattaaaaataatgcaagat gaatgggatgctgtcatgttgcattcatttacattaagacagcagcttcaaactgcaagg caggaattatcacatgcattgtatcaacatgatgcagcttgtcgtgtcattgctagatta aataaagaagttactgctgcccgagaagcgcttgctaccctcaaaccacaggctggaatt gttcaagctactacaatcccacagcctgccgtggcagtagaagctggtggaacagcagcc caaccaatggaacaggctggtatcaccgaagatgtaatacaaaaacttcaagagcgagca accgttcttacacaagagcgaaaacgacggggacgctcggtaccggaagatcttatgcct caggacagtatacgatcgttccaaactcttgcatcacatcccgggcttcattctgccagt gtgcctggaattttggcactcgatattcacagtgctgataccagtaagattttaacaggt ggagcggataaaaatgctaccgtttttaacaaagatacagagcaagtagttgcaattctc aagggtcacacaaaaaaagttacacgagtaatttatcatccagaggaagatgtagtcatg actgcatcaccggatactacaattcgtgtgtggaatgtcggtaccagtcaaacgacacta ttactaaaagctcacgacgcacctgtcactggattgtctttacatcctaccggcgattat ttgttaagctcttccttagatcaacattgggccttttcagatatacgtaccggcagatta ctgactaaaattgccggacaagcaggacaacccttgacaacagcacagtttcatcccgat ggtttaattttcggcactggtaccgcggactctcaagtgaaaatttgggatttgaaagag caatctaatgtcgcaaactttccggggcatacaggtccgataacagcaatcagcttttcc gagaatggttattatttggcgacagctgctgaagattcgtgtgtcaaactttgggattta cgcaagttgaaaaactttaaaacattacaattggaggagtcttacgaagtaaaggatatt tgcttcgatcaaagtggaacgtatttagctgtggcaggaacagatgttagggtttacctt tgtaaacagtggcaagaattaaaggtcttaaatgatcacactgcggcggccacaggcgtt cgtttcggaaagcatgcacaatatatcgcgtccaccagtatggacaggacattgaaactc tatggattatcataa

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