Cardiocondyla obscurior: 139110919
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Entry
139110919 CDS
T10704
Symbol
Tsen54
Name
(RefSeq) uncharacterized protein Tsen54
KO
K15326
tRNA-splicing endonuclease subunit Sen54
Organism
cobs Cardiocondyla obscurior
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cobs03016
]
139110919 (Tsen54)
Transfer RNA biogenesis [BR:
cobs03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
139110919 (Tsen54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_end_N2
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
139110919
NCBI-ProteinID:
XP_070526984
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Position
LG22:complement(4040538..4044156)
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AA seq
796 aa
AA seq
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MDEPPKKLPCNKLTAKELLRSKGINNCVLEEWERSLKTLPRNGKKHFEPDNSWLQNIQIE
KGLKNRRDLLNIERVERISELASAEWLPAQKKALVTKRSGQDWSNFGLEKNGSLYLLPEE
ALFLLETNCLELFWNDLSCSIQQAYEILIDNLTCTLEEYRVYSQLIRYGYHIQRYIYEES
DKCSRSDELTTVKRKIIVEPETGLRMSDNQSQNKQSVQKPQLILVQDIPETLSKSHVNHS
TKHHEKAGLQESVEQIVCSLVDQVVNSVESQECGNKPATSRGESNEESNTNAEEKNRNSK
PEIIADETLLGNIKILRDKPSKWPGSRIQRNVKQLPKRNDKLSHPDISIIDTNFTDKSAK
YPEKRKMFTQTDDSHEKKPPKHEVIELSDDEIQELPRCMTRMEMLNLLPNIALQSEINEK
ISKRYIPQNVRPQRSLYQYNRTMILNMQENDKRARQNCKENRIRRQIAFHSRSPLAVNNR
NAFFQNQRSILRSSSRSFYSLDQMHGTNIGLPYAVNYLTSDVYLQNRLMHTQNVFQNTYV
AFGNHGNAVQQRSLTIQMNNFMMPIVDGFRTRNLFIENQLRHNFYHNDVWQQRFCQRRTI
ERENTFVHGNAHSVVRRRYDDANSLVGHETINRPSFTTRLGAASWVELKKKWSEEKTITI
DDEDYKNKSENEEDCTEVRVVKLLHPLVGPRNAFSLAEVFNKLAIIKSAPERSVRRKKSK
YKISYNVYSCVHHYRKANPGQPLYSLVVIRKEDSILQPVELNRLQQDAKGSQIILAYVSM
SISYIQPGIITTPNII
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atggacgagccgcctaaaaaactaccgtgcaacaagctaacggccaaagaattattacgc
agcaagggcattaacaactgtgtgctagaggaatgggagagatccctgaaaacattgccc
agaaatggaaagaaacacttcgagcctgataactcctggcttcagaatattcagatagag
aagggacttaagaatcgcagagacctgttgaatatcgaaagggtcgaacgtatttcggag
ctggccagcgccgagtggctgcccgctcagaagaaggctctcgttacaaagagatccggg
caggattggagtaattttggcttggagaaaaacggttccttgtatttattgccggaagaa
gcgctgtttctcctagagaccaattgccttgaactcttttggaacgatttgtcatgctcg
attcagcaggcatatgaaatcttgatcgacaacttgacgtgtactttggaagaatacaga
gtctacagtcaattgatacgttacggttatcacatacagcgctacatttacgaggagtca
gataagtgtagcagatcggacgagctcactaccgtcaagcggaaaattattgtcgaacct
gagactggattgagaatgtccgacaatcaatcgcagaataagcagagtgtacagaaaccg
cagctaatattagtgcaggatattccagaaactttaagtaaatcccatgttaatcatagc
acaaagcaccatgaaaaggcaggcctacaagaatccgtggagcaaatagtgtgcagtcta
gtagatcaggttgtaaatagcgtagaaagtcaggaatgtggaaacaaaccggctacttcc
cgaggagagagcaacgaggaaagtaatacgaatgccgaagaaaaaaatcgaaattctaaa
ccagagataattgcagacgaaactttgttaggcaatatcaagatccttcgagacaaaccg
tcgaagtggccaggttcccgcattcagcgtaacgttaagcagctgcctaagagaaacgat
aaattatcacacccggatatttctataatcgatactaattttacagacaaaagtgcaaaa
tacccggagaaacgaaagatgttcacgcaaactgacgattcgcacgaaaaaaaaccaccc
aagcacgaggtgatcgagttgtcagacgacgagattcaggaattaccgcgctgcatgacg
agaatggaaatgctgaatttgctgccgaatatcgctctccagtcggagatcaatgagaaa
atatccaagcgatatataccgcaaaacgtaagacctcaaaggagcttgtaccaatacaat
cgaacgatgattttaaacatgcaggagaatgacaaacgagcgcgacagaactgcaaagag
aataggattagaaggcaaattgcatttcactccagaagcccgctcgccgtcaacaatagg
aacgctttctttcagaatcaacgctcaatcctgcgcagctcgtcgcgatcgttctattct
ctagaccaaatgcacgggactaacattggcctaccttacgcggtcaattaccttacctcg
gacgtttacctgcagaatagactcatgcacacgcagaacgtgtttcaaaacacgtacgtt
gctttcggaaatcacgggaacgccgttcagcagagaagcctcactatacagatgaacaat
tttatgatgccgatcgtggacggatttcggacgaggaatttgttcatagagaatcaactg
cggcacaatttctatcacaatgacgtgtggcagcagagattttgccagaggagaacgata
gaaagagaaaatacgtttgtgcacggcaatgcgcattccgttgtacgacgacgatacgac
gatgctaacagtctagtcggccacgagaccattaatcggccttcgttcacgacacgtcta
ggagccgcttcgtgggtggagttgaagaaaaagtggtccgaagagaaaaccattactatc
gacgacgaggattataaaaacaaaagtgaaaacgaagaagactgcacggaagtgcgggtt
gtaaagcttctgcatcctttagtcggtccaaggaacgcgttttctctggcagaagtgttt
aataagctcgctataataaaatcagcgccagaaagaagcgtcagaaggaagaaaagcaaa
tataagatatcgtacaacgtatattcctgcgtgcatcattatagaaaagcgaatcctggt
cagccgttgtacagcctggtagtgataaggaaagaagactcgattctccagccggtcgag
ttgaatcgcttacagcaggacgcaaaaggttctcagataatattagcatacgtgtcgatg
tcgatatcgtatatacagccgggtattattacgacgccaaacataatttaa
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