Cardiocondyla obscurior: 139113070
Help
Entry
139113070 CDS
T10704
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
cobs Cardiocondyla obscurior
Pathway
cobs04140
Autophagy - animal
cobs04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cobs00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
139113070
04148 Efferocytosis
139113070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cobs04131
]
139113070
Membrane trafficking [BR:
cobs04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
139113070
Hops complex
139113070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
Beta-prop_EML_2
zf-C3H2C3
TPR_11
Motif
Other DBs
NCBI-GeneID:
139113070
NCBI-ProteinID:
XP_070530059
LinkDB
All DBs
Position
Unknown
AA seq
840 aa
AA seq
DB search
MAFLEWRRFNFFDLKKEVDLGKIAKALGDAQVVAATSGNGNLVLGDNSGGIHLINRSYEI
TTFRAYEITLVLAQQVQHSTFLFTIGEDEHGCNPTIKVWNLAKPDKQGNPTCVRISRAIP
SYRAVPATALCVHTSLTLMAIGFGDGSIMLYRGDLTRERKNKIKVLKDVNLSITGLAIRA
TGKQTYLFVATQNCVFLYNITIKDKEFKSALDNMGCTRKCSVLETMQDNHFMVGRNDAIY
CYTPDGRGPCYAVEGQKIMLEWFRTYLVIVAKEAANVPRTTISTKPNTIEPIPPGVDKHI
ITVLDIQNKFIVFSAPMVSVQAVLSEWGGFFILSGDNKLYHLDEKDLQSKLALLFKKNLY
DVSIRIAKNQQYDAEGLIDIFRQYGDHLYSKGDHNGAIEQYIKTIGKLEPSYVIRKFLDS
QHIDNLTTYLQALHKNGQATEDHTTLLLNCYTKLNHTDKLKEFIMTKDREVDFDVEIAIK
VCRQASPEDALLLAQKHSKHEWYLRIQIEDKQEYKKALEYMATLEFEEAEVNMKKYGNIL
IENVPSESTQFLKALCTNYKPSNKPLVDQEALNGYTEQRVDKASPEDFIHLFLNNSERLV
EFLEHLVKSDTKWSTLIYNTLVEHYLHVWSALNNDVTKLQYEQKIVRLLQNSEARYDKDQ
ILILCHQHNFRKGLLFLYEENKLYQEILRFHLSEGNSEQVLATCKRFGHQDPNLWVQALW
SVAKNKNASTKLLADILAYIAQERLLSPLMVIDAISTSLTCTLGDVRSYLCSVLRTENEQ
TQADTELTEKYRADTLKLREQIEVIKNNTIIFQGSRCSACHHQLELPSVHFMCQHSYHQQ
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttctggagtggaggcgttttaatttctttgatttgaaaaaagaagtcgactta
ggaaagatcgccaaagcattaggagacgcgcaagttgtggcagctaccagtggtaatggc
aatctagtgctcggcgacaatagcggcggaattcatttaataaatagatcgtatgaaatt
acaacttttcgagcttacgaaattacattagtattggctcaacaagtgcaacattccact
tttttatttactattggtgaagatgaacatggatgcaatcctactataaaggtgtggaac
ttggcaaagcctgataaacaaggtaatccaacatgcgttcgaataagcagagctatacct
agctatagagcagtcccagcaacagctctatgtgtacatactagtcttacattgatggct
attggatttggtgatggatctattatgctgtatagaggtgacctgactcgagagcgaaag
aacaagataaaagtcttaaaggatgttaatttgtctattaccggccttgcaatacgagca
actggtaaacaaacttatttgttcgttgccacgcaaaattgtgtgtttctgtataatatt
actattaaggataaggaatttaaatctgccttggataatatgggttgcacgcgaaaatgc
agcgtactcgagactatgcaggacaatcactttatggtcggacgtaatgatgctatttat
tgttacacaccagatggcagaggcccatgctatgcagtggagggtcaaaagataatgcta
gaatggtttaggacatatttggtgattgtagcaaaagaagcagcaaatgttccgagaaca
actatatccaccaaacccaacacaatagaaccgatacctccaggtgttgataaacacatt
ataactgtgcttgatattcaaaataagtttattgtgttttctgcaccaatggtgtctgtc
caagcagtcttatcagagtggggtggattctttatacttagtggagataacaaattgtat
catttagatgaaaaagacttgcaatcaaaattagcattgcttttcaaaaagaatttgtac
gacgtttctataagaatagctaaaaatcaacaatatgatgcagaaggtctcatagatatt
ttccgtcaatacggagatcatttatattctaaaggagatcataatggtgcaatagagcaa
tatataaaaactataggcaaattagaaccgtcttatgtgataagaaaattcttggattct
cagcatattgataatttgaccacatatttgcaagcattgcataaaaatgggcaagctaca
gaggatcatactactttgttattaaattgttatactaaacttaatcacactgataagttg
aaagaatttattatgacaaaagatcgtgaagttgatttcgacgtggaaattgctataaaa
gtttgccgtcaagcatcacctgaagatgccctgttactcgcacagaaacacagtaaacat
gaatggtatcttcgtatccaaatcgaagataaacaagaatataaaaaggctttggaatac
atggcaacgttagaattcgaagaggctgaagtaaatatgaagaaatatggaaatatttta
atagaaaatgtgccaagtgaatccacacagtttttgaaagctttatgcacgaactacaaa
ccttccaacaaacctcttgtagatcaggaagctttaaatggctatacagaacagcgtgtc
gataaagctagtccagaagattttattcatttatttttaaataattctgaacgactcgta
gagttcttggaacatttagttaaatcagatacaaagtggagcacacttatttacaatacg
ttagtggaacattatttgcatgtttggtcagcgttaaataacgatgtaactaaactacaa
tatgaacagaaaattgtacgacttttacaaaattctgaggctcgttatgataaagatcag
atactaatactttgtcatcaacataatttcagaaaaggattactattcctttatgaagag
aacaaactatatcaagaaatattgagatttcacttaagtgagggtaatagtgaacaagtg
cttgccacttgtaaacgatttggtcatcaagatcccaatttgtgggtacaagctctatgg
agtgtagctaaaaacaagaacgcgtcaacaaaacttctcgcagatatattagcttatata
gctcaagaaagactgttatctcctttgatggttattgatgcaatttctacatcgttaacc
tgcacgttaggagacgttagaagttatttgtgcagtgtattacgaacggagaatgaacaa
actcaagctgatacggaattaacagaaaaatacagagctgatactcttaaattacgggaa
caaatagaagtgataaaaaacaacacgattatttttcaaggatcacgatgtagcgcgtgc
catcatcagttagaactgccgtctgtgcatttcatgtgccagcattcgtatcaccaacag
taa
DBGET
integrated database retrieval system
