Cohnella abietis: KCTCHS21_00060
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Entry
KCTCHS21_00060 CDS
T05979
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
cohn
Cohnella abietis
Brite
KEGG Orthology (KO) [BR:
cohn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cohn03032
]
KCTCHS21_00060 (gyrB)
03400 DNA repair and recombination proteins [BR:
cohn03400
]
KCTCHS21_00060 (gyrB)
Enzymes [BR:
cohn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
KCTCHS21_00060 (gyrB)
DNA replication proteins [BR:
cohn03032
]
Prokaryotic type
DNA Topoisomerases
KCTCHS21_00060 (gyrB)
DNA repair and recombination proteins [BR:
cohn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KCTCHS21_00060 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Vmethyltransf_C
Motif
Other DBs
NCBI-ProteinID:
BBI30607
UniProt:
A0A3T1CXM9
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All DBs
Position
4436..6352
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AA seq
638 aa
AA seq
DB search
MSVNSQHNTYDESQIQVLEGLEAVRKRPGMYIGSTSGKGLHHLVWEVVDNSIDEALAGYC
NRIDVIIHEDDSITVIDNGRGIPVGENAKLKKSTLEVVMTVLHAGGKFGGEGYKVSGGLH
GVGVSVVNALSEQVVVTVKRDGQIYEQEYRRGAAQHELKIVGNTEETGTTVRFKPDSMIF
TETTVFDYDTLAGRIRELAFLNKGIEINLTDERTEMSDTFHYEGGIIEFVQYLNRTRDPL
HELPIYVEGTKDHINIEVALQYNDGYSENIYSFANNINTHEGGTHESGFKSALTRIINDY
SRKMGFVKENESNLTGDDVREGLTAIISVKIPEPQFEGQTKTKLGNSEVRGLVESLFSEK
LQQFLDENPAVARKVMEKSLQAARAREAARKARELTRRKSALEVSSLPGKLADCSSKDAS
ISEIYIVEGDSAGGSAKLGRDRHFQAILPLRGKILNVEKARLDKILSNLEIRAMITALGT
GISDDFDIAKARYHKIIIMTDADVDGAHIRTLILTFFYRYMRKLIEEGYIYIAQPPLFKI
ERSKTVRYAMSEKERDTIISEFGEGAKLTIQRYKGLGEMNGTQLWETTMDPDTRTMLQVR
IEDAIKADLMFDTLMGDNVEPRREFIQQYAKYVKNLDV
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
ttgtccgttaattcacagcataatacttacgacgagagtcagattcaagtcttagaaggc
ttggaagcggtacgcaaacgtcctggtatgtatattggatcaaccagcggtaagggcttg
catcatcttgtatgggaagtcgtcgataatagcattgatgaggcgttggccggttattgt
aatcggatcgacgttattattcatgaagacgatagcatcactgtcattgataatggacgg
ggtattccagttggtgagaatgctaagctaaagaaatcaacccttgaagttgttatgact
gttcttcatgcgggtggtaagtttggcggagaaggctataaggtatccggcggtttgcat
ggtgttggtgtatccgttgtgaatgctttgtccgagcaggttgtcgttaccgttaaacgc
gatggccaaatttatgagcaagagtatcgccgaggagcagctcagcatgagctgaagatc
gtcggaaatacagaagaaacaggaacgacagtaaggtttaaaccggattcgatgatcttt
acagaaacaacggtgttcgattatgacacactggctggacgtattcgggagcttgctttc
ctcaacaagggaatcgagattaatctaaccgatgaaagaacggaaatgagcgatactttc
cactacgaaggcggaattattgagttcgttcaatatcttaatcgtactcgtgatcctttg
catgagctgccaatttatgtagaaggcacgaaggatcatattaacattgaggttgctttg
caatataacgatggttattcagagaatatctattcgttcgctaataatatcaatactcat
gaaggcggtacgcacgaatccggctttaagagcgccttaacaagaattattaacgattac
tctcgtaaaatgggttttgttaaggagaacgagtctaacttaaccggcgatgatgtaagg
gaaggcttgacggcgattatttccgttaaaattcctgagccgcaattcgaaggacaaacg
aagacaaagctcggtaacagcgaggttcgcggtttagtagagtctttgtttagtgaaaaa
ttgcagcagtttttggatgaaaatccagccgttgctcggaaggtcatggagaaatcactt
caagctgctagagcacgtgaagctgcgcgtaaagcacgtgagctgactcgtcgtaagagc
gctctggaagtaagctcccttcctggtaagttggcggattgttcttccaaggatgcatcc
attagtgagatttacatcgtagaaggtgactctgcaggtggatcggctaagctaggacgt
gatcgtcacttccaagcgatattgccgctccgcgggaaaatcctcaacgttgaaaaagca
cggttggataaaattctatccaatttggaaattagagcgatgatcacagcactcggcact
ggaatcagcgacgattttgacatcgctaaggccagatatcataagatcattattatgacc
gatgccgacgtggatggagctcatatccgtactcttatccttacgttcttctatcgctac
atgcgtaagcttatcgaagaaggatacatctatatcgctcagccaccattgttcaagatt
gaacgcagcaaaacagtgcgttatgcgatgagcgaaaaagaacgtgataccatcatcagc
gagttcggagaaggcgctaagctgactatccagcgttacaaaggactgggagaaatgaac
ggtacccagctttgggaaacgacaatggatcctgatactcggacgatgcttcaggttaga
attgaagatgcaattaaagctgatttaatgtttgatactctaatgggcgataacgtagaa
ccccgtcgggaatttattcagcagtatgctaaatacgttaagaatttggacgtgtaa
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