Cohnella abietis: KCTCHS21_60320
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Entry
KCTCHS21_60320 CDS
T05979
Symbol
uvrD_3
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cohn
Cohnella abietis
Pathway
cohn03420
Nucleotide excision repair
cohn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cohn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KCTCHS21_60320 (uvrD_3)
03430 Mismatch repair
KCTCHS21_60320 (uvrD_3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cohn03400
]
KCTCHS21_60320 (uvrD_3)
Enzymes [BR:
cohn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KCTCHS21_60320 (uvrD_3)
DNA repair and recombination proteins [BR:
cohn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KCTCHS21_60320 (uvrD_3)
MMR (mismatch excision repair)
Other MMR factors
KCTCHS21_60320 (uvrD_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
Viral_helicase1
SLFN-g3_helicase
DEAD
AAA_30
NACHT
AAA_16
nSTAND3
T2SSE
PhoH
ResIII
Lyase_aromatic
Motif
Other DBs
NCBI-ProteinID:
BBI36633
UniProt:
A0A3T1DEW3
LinkDB
All DBs
Position
complement(6849215..6851572)
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AA seq
785 aa
AA seq
DB search
MVNPKDWQQEQERLDVVTEGLRSKIAELEPEVSGLFNQVTDFRKRFWEEVTVNTTTHEDF
ADTFYSIKQQEVLLSERERTHRQRMQRWKSMNRLLPSPYFGRIDFREDGLSLDEQIYIGV
SSFVDVDDMSFLVYDWRTPIASMYYDYSPGSADYETPDGQITGEMTLKRQYQIRDGKLRN
VFDTSLTIGDELLQQVLGAGGDAQMKSIVATIQKEQNAIIRNDKRRMLIVQGAAGSGKTS
AALQRVAYLLYKHRKTLKADQIVLFSPNPMFNSYVSTVLPELGEENMQQTTFQEYLAYWL
GSTLGLEDPFEQIEYVLNSKLSQEDAARQSGIEYKASEAFLQALQHYALWLGKEGMLFHS
IRFRDRELITSEQMKSRFYSYDSSIGVANRVELLREWLLRELTSLERMEQEALWVQDELD
YLDNEQYAEAYSTLLKKDQQEEEVFDFAGQEEELLRRMIVREQFKPLRRHAMRFMFVDTI
GLYDQLFSEEASYRQMTNETEIPNQWPEICKQTKEKLSRLELFYEDATPFLYLKELIEGT
RKNTEVRHLFVDEGQDYSPFQYAFLKQLFPRASMTVLGDFSQAIFPQATNLHNVDSPLIR
LYGKEETSLIRLDRSYRSTRDIVDFTKSLLHDGEGIVPFDRSGRKPLLVKSGSSDKRAVR
MIDDLAELKTEGFDTIAIITKTEAESRDAYEALMKQGCEDLRLITKETLTFVKGTVVIPA
YLAKGVEFDAVLIYDASTLAYNRESERKLFYTACTRAMHRLVLYSIGEWSPYLQALDTTL
YEAVQ
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggtaaatccaaaggattggcagcaagaacaagagcggctagatgtagttacggaagga
ctgcgatcgaaaatcgccgaactggagccggaggtgtccgggctgttcaatcaggtgacg
gattttcgcaaacggttctgggaagaagttacggtcaatacaaccacacatgaggatttt
gcagataccttctatagtataaaacagcaagaagtgttgttgtcggagcgggagcgcact
catcgacaaagaatgcagcgttggaaaagcatgaatcggctactgccatctccctacttc
gggcgcatagattttcgagaggatggcttgagtcttgacgagcaaatctatatcggcgta
tcatccttcgtcgatgtagacgacatgagctttctggtgtatgactggcggacgccgatt
gcaagtatgtactatgactattctccgggctcggccgactatgaaacaccggacggacaa
atcacgggcgagatgacgctgaagaggcaataccagatccgtgacggtaagctccggaat
gtgttcgacacgagcttaacgatcggcgacgaattacttcagcaggtgcttggagcgggt
ggggatgcgcaaatgaagagcatcgtagcgaccatccaaaaggagcaaaatgccatcatc
cgtaacgataagcgccgtatgctcattgtgcagggagcggctggaagcggaaagacgtcc
gcggctctgcagcgggtagcgtatttgttgtacaaacaccgcaaaacactcaaggcggat
cagatcgttcttttctcgcctaatccaatgtttaatagttatgtatccacggtgcttccc
gagctgggcgaggagaacatgcagcagacaacctttcaagaataccttgcgtattggctt
ggttccacgttgggcctagaggatccgtttgaacagatcgagtatgtgctcaattcgaaa
ttatctcaagaagatgcggcacggcagagtggaattgaatataaagcgtccgaagcattc
ctgcaagctcttcagcattatgcgttgtggctgggtaaggaggggatgttattccacagc
atacgtttccgggatcgcgagttaattacttcggagcagatgaagtcccgattttacagc
tatgacagttccattggagtggctaatcgagtcgagctgttgcgggaatggctgctgcga
gagcttacttcgctggagcgtatggagcaggaagcgctttgggttcaggatgagctcgat
tacctcgacaacgagcaatatgccgaagcttacagtacgctgcttaagaaggatcagcaa
gaggaggaggtcttcgatttcgccggacaagaggaagaattgctgcgtcgaatgatcgtg
cgagagcagttcaaaccactgaggcggcacgcgatgcgattcatgttcgtggatacgatc
gggctgtacgatcagttgttcagtgaggaagcctcttataggcaaatgacgaacgagacc
gaaataccgaatcagtggccggaaatttgcaagcaaacgaaggagaagctgagtcggctc
gagctgttttatgaggatgcgacaccgttcctttatttaaaagaacttatagagggtaca
cggaagaacacggaggttcgtcacctgtttgtggatgaaggtcaggactattcgcccttc
caatacgcgtttcttaagcagctttttcctcgagccagcatgacggtgcttggtgatttc
agtcaagcaattttcccgcaagcaacaaatctgcataatgtggattcgcctttgatccgg
ctatacggcaaagaagaaacgagccttatccgccttgacagaagttatcgctcaacccgt
gatattgtggatttcactaagtctctgctgcatgacggtgaggggatcgtacccttcgat
cggagtggtcggaagcctctcctcgtgaagtcaggcagtagcgacaagcgggcggtacga
atgatagacgacctcgcggagctcaagacggaaggcttcgacaccattgccatcataacg
aagacagaagccgaaagccgtgatgcctatgaagcattaatgaagcaaggctgcgaggat
ctacggcttattacgaaggagacgcttacgttcgtgaaggggactgtggtgattcctgcc
tatcttgccaagggcgttgagttcgacgcggtactgatctacgatgcatctacgcttgcg
tacaaccgggaaagtgaacgcaagcttttctatactgcatgcacgcgtgccatgcatcgt
cttgtactttactcgataggagaatggtctccctatttacaggcgctggatacgaccttg
tatgaggcagtacagtag
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