Colwellia sp. Arc7-D: DBO93_04005
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Entry
DBO93_04005 CDS
T05422
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
cola
Colwellia sp. Arc7-D
Pathway
cola03030
DNA replication
cola03430
Mismatch repair
cola03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cola00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DBO93_04005 (holA)
03430 Mismatch repair
DBO93_04005 (holA)
03440 Homologous recombination
DBO93_04005 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cola03032
]
DBO93_04005 (holA)
03400 DNA repair and recombination proteins [BR:
cola03400
]
DBO93_04005 (holA)
Enzymes [BR:
cola01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DBO93_04005 (holA)
DNA replication proteins [BR:
cola03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DBO93_04005 (holA)
DNA repair and recombination proteins [BR:
cola03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DBO93_04005 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
AWB56806
UniProt:
A0A2S0UXX0
LinkDB
All DBs
Position
complement(915830..916873)
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AA seq
347 aa
AA seq
DB search
MRIYHSNLDKTLNQGFQPIWLVFGDELWQKNDALEKIKLHAKKQGFAEIIRFSIDDKFDW
DELFQEYLSMSLFSPLRIIEIEFTSGKIGDNGAKGVAKLLTLLHQDIQLIFHGPKLDAAT
QKRKWFKSLEAAGCFVPLYDVEGKQLKQWLNNQARHLQLNLAPDVIDLMAELFEGNLPAL
EQELQKLSILFSQQTVTFEEAENLFIKQAKFSPFQLIDTLLIGDLKKCLKILDQMQHDGS
AFGQLIWVVHKEISQLYAMLEQMDQGSGINDIFKQYRIWEKKKPLYQHALKHITLTQAEQ
ALARLAQVDLLSKTSSDFNAFILLSDVFISLFHHELSQNFSLDYEYN
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatataccatagtaacctcgacaaaacgcttaaccaaggctttcagccaatatgg
ttagtatttggtgatgagctatggcaaaaaaatgatgccttagagaaaattaagctgcat
gccaaaaaacaaggttttgcggaaataattcgctttagtatcgacgataaatttgattgg
gacgaactctttcaagagtacctatcgatgagtttgttttcgccattacgtattatcgaa
atagaatttacttcaggtaaaattggcgataatggcgctaagggtgtagcaaaattactc
acccttttacatcaagatattcaacttatattccatggtccaaaattggatgcggcaacg
caaaagcgaaagtggtttaagtctttagaagcagcaggttgttttgtacctttgtatgat
gttgaaggtaagcaattaaaacaatggttgaataatcaagcaaggcacttacaacttaac
ttagcacctgatgtcattgatttaatggcagagttatttgaaggtaacctccctgcactt
gagcaagagttgcaaaagctttcaattttgttttcacaacaaacagtaacctttgaagaa
gctgaaaacctttttatcaaacaagctaagtttagcccttttcaacttatcgatacgtta
ttgattggcgacttaaagaaatgtttgaaaattttagaccaaatgcagcacgacggtagt
gcttttggtcaattaatttgggttgtgcataaggaaataagccaactttatgccatgtta
gaacaaatggatcaaggcagtggtattaacgatatttttaaacaatatcgcatatgggaa
aagaaaaaacctttatatcaacatgcgttaaagcacattaccttaacgcaagcagagcaa
gctttagcaaggttagcgcaggttgatttactcagtaaaacgagcagtgactttaacgcg
tttattttactcagtgatgttttcatcagcttatttcatcatgaactaagtcaaaacttt
agtttagattatgagtataactaa
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