KEGG   Colwellia sp. Arc7-D: DBO93_04005
Entry
DBO93_04005       CDS       T05422                                 
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
  KO
K02340  DNA polymerase III subunit delta [EC:2.7.7.7]
Organism
cola  Colwellia sp. Arc7-D
Pathway
cola03030  DNA replication
cola03430  Mismatch repair
cola03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cola00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DBO93_04005 (holA)
   03430 Mismatch repair
    DBO93_04005 (holA)
   03440 Homologous recombination
    DBO93_04005 (holA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cola03032]
    DBO93_04005 (holA)
   03400 DNA repair and recombination proteins [BR:cola03400]
    DBO93_04005 (holA)
Enzymes [BR:cola01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     DBO93_04005 (holA)
DNA replication proteins [BR:cola03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     DBO93_04005 (holA)
DNA repair and recombination proteins [BR:cola03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     DBO93_04005 (holA)
SSDB
Motif
Pfam: DNA_pol3_delta DNA_pol3_delt_C DNA_pol3_delta_C
Other DBs
NCBI-ProteinID: AWB56806
UniProt: A0A2S0UXX0
LinkDB
Position
complement(915830..916873)
AA seq 347 aa
MRIYHSNLDKTLNQGFQPIWLVFGDELWQKNDALEKIKLHAKKQGFAEIIRFSIDDKFDW
DELFQEYLSMSLFSPLRIIEIEFTSGKIGDNGAKGVAKLLTLLHQDIQLIFHGPKLDAAT
QKRKWFKSLEAAGCFVPLYDVEGKQLKQWLNNQARHLQLNLAPDVIDLMAELFEGNLPAL
EQELQKLSILFSQQTVTFEEAENLFIKQAKFSPFQLIDTLLIGDLKKCLKILDQMQHDGS
AFGQLIWVVHKEISQLYAMLEQMDQGSGINDIFKQYRIWEKKKPLYQHALKHITLTQAEQ
ALARLAQVDLLSKTSSDFNAFILLSDVFISLFHHELSQNFSLDYEYN
NT seq 1044 nt   +upstreamnt  +downstreamnt
atgcgtatataccatagtaacctcgacaaaacgcttaaccaaggctttcagccaatatgg
ttagtatttggtgatgagctatggcaaaaaaatgatgccttagagaaaattaagctgcat
gccaaaaaacaaggttttgcggaaataattcgctttagtatcgacgataaatttgattgg
gacgaactctttcaagagtacctatcgatgagtttgttttcgccattacgtattatcgaa
atagaatttacttcaggtaaaattggcgataatggcgctaagggtgtagcaaaattactc
acccttttacatcaagatattcaacttatattccatggtccaaaattggatgcggcaacg
caaaagcgaaagtggtttaagtctttagaagcagcaggttgttttgtacctttgtatgat
gttgaaggtaagcaattaaaacaatggttgaataatcaagcaaggcacttacaacttaac
ttagcacctgatgtcattgatttaatggcagagttatttgaaggtaacctccctgcactt
gagcaagagttgcaaaagctttcaattttgttttcacaacaaacagtaacctttgaagaa
gctgaaaacctttttatcaaacaagctaagtttagcccttttcaacttatcgatacgtta
ttgattggcgacttaaagaaatgtttgaaaattttagaccaaatgcagcacgacggtagt
gcttttggtcaattaatttgggttgtgcataaggaaataagccaactttatgccatgtta
gaacaaatggatcaaggcagtggtattaacgatatttttaaacaatatcgcatatgggaa
aagaaaaaacctttatatcaacatgcgttaaagcacattaccttaacgcaagcagagcaa
gctttagcaaggttagcgcaggttgatttactcagtaaaacgagcagtgactttaacgcg
tttattttactcagtgatgttttcatcagcttatttcatcatgaactaagtcaaaacttt
agtttagattatgagtataactaa

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