Colwellia sp. PAMC 21821: A3Q33_05905
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Entry
A3Q33_05905 CDS
T04816
Symbol
lpxC
Name
(GenBank) UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
colw
Colwellia sp. PAMC 21821
Pathway
colw00540
Lipopolysaccharide biosynthesis
colw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
colw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
A3Q33_05905 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
colw01005
]
A3Q33_05905 (lpxC)
Enzymes [BR:
colw01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
A3Q33_05905 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
colw01005
]
Lipid A
A3Q33_05905 (lpxC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Polyhedrin
Motif
Other DBs
NCBI-ProteinID:
ARD43887
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All DBs
Position
complement(1414536..1415453)
Genome browser
AA seq
305 aa
AA seq
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MIKQRTLKESVSAIGVGLHKGEKVQITLRPAPANTGIIFRRVDLDPVVDIPATPEAVGET
TLCTCLVNEQGVQISTVEHLLSAVAGLGIDNLIVEVDSPEIPIMDGSALPFVYLIQSVGI
ATSNVAKRFLRITKAIRVEEGDKWAELKPYEGFRVNFAIEFEHPVIVNTCQAMSMDLSSC
SFIKEISRARTFGFMKDIEFLRSHNLALGGSLENAIVLDEYRMLNKDDLRYDDEFVKHKI
LDAIGDLYMGGVSILGELNAFKSGHALNNMLLREVFKQVDCWEWVTYEDTAESPIQYQEI
NAAAF
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgattaaacaacgtacgttaaaagaaagtgtctctgctattggtgtagggttacataaa
ggtgaaaaggtgcagattactctccgacctgcgcctgcaaacaccggtattatttttcgc
cgagttgatttagatcccgttgtcgacatccccgcgacaccggaagctgtgggtgaaact
accctttgtacgtgtttagtgaatgagcaaggtgttcagatttccaccgtcgaacattta
ctctctgctgttgcaggtttaggcattgacaaccttattgttgaggttgactcacctgaa
attccaattatggatggtagtgctttaccgtttgtttatttaatacaatcggttggtatt
gcaacgtcaaatgttgctaaacgctttttacgtattactaaagctatacgtgtagaagaa
ggcgataaatgggctgaattaaagccttatgaaggttttcgcgtcaattttgcgattgaa
ttcgaacatcctgtgattgtaaatacttgtcaagcgatgagtatggacctgtctagttgt
tcatttatcaaagaaattagtcgtgcacgtacctttggctttatgaaagacattgagttt
ttacgctcgcataatttagcactgggtggcagtttagaaaacgccattgtgttagacgaa
taccgtatgttgaataaagacgacttgcgctatgatgacgaattcgtaaaacataaaatt
ctagatgctattggtgacttgtacatgggtggcgttagtattttaggtgaactcaatgcc
tttaaatctggccatgccttaaacaacatgttgctacgtgaagtctttaaacaagtagac
tgctgggagtgggttacttatgaagataccgcagagtcaccgattcaatatcaagagatt
aacgcagccgctttttaa
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