Colwellia sp. MT41: CMT41_03360
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Entry
CMT41_03360 CDS
T04159
Name
(GenBank) ABC-ATPase UvrA
KO
K03701
excinuclease ABC subunit A
Organism
com
Colwellia sp. MT41
Pathway
com03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
com00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CMT41_03360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
com03400
]
CMT41_03360
DNA repair and recombination proteins [BR:
com03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CMT41_03360
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CMT41_03360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
AAA_16
RsgA_GTPase
nSTAND1
nSTAND3
AAA_22
AAA_23
AAA_25
DnaJ_CXXCXGXG
AAA_24
AAA_21
NACHT
cobW
T2SSE
Viral_helicase1
Glu_synthase
Motif
Other DBs
NCBI-ProteinID:
ALO33868
UniProt:
A0A0S2JCW4
LinkDB
All DBs
Position
complement(788028..790859)
Genome browser
AA seq
943 aa
AA seq
DB search
MKSIEVRGARTHNLKDISLTIPRDKLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTTTEIYDYLRLLYARVGEPRC
PEHGQALAAQTVSQMVDKVLALEKGTKVMLLAPIVQDRKGEHVKLLDNLAAQGFIRVRID
GEICDLSDPPPLELQKKHTIEVVVDRLKVRDEIQLRLSESFETTLALTSGTAKVAFMDEP
DREELLFSANFACSHCGYSMEELEPRLFSFNNPAGACQTCDGLGIEQFFDSSRVIANEKL
SLADGAVRGWDKRNFYYFQMLQALAEHYNFKVDKPFNRLSAEAQKVVLYGSGKQEIEFKY
MNDRGDVVMRKHPFEGIINNMQRRYKETESNSVREELGKYLNSHHCPDCNGSRLRLEARN
VFIDDTPLPVIAELSISDALTFFQGLTLTGQKGQVAEKILKEINQRLGFLVNVGLNYLNL
SRGANTLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLSTLIHLRDLGNT
VIVVEHDEEAIRAADHIIDIGPGAGVHGGEIIVQGTVEDILACKESLTGRYLSGVERIEI
PKKRHAFNKKAVIELKGASGNNLKHVNLVIPTGLMTCITGVSGSGKSTLINDTLYKLAHI
ELNGATIDEPAPYKSIHGLEHLDKVIDIDQSPIGRTPRSNPATYTGIFTAVRDIFAATQE
SRSRGYKSGRFSFNVKGGRCEACQGDGMIKVEMHFLPDVYVPCDVCKCKRYNRETLEVLY
KGKNIHQVLDMTIEDAFEFYQAIPSIKRKLQTLMDVGLSYIKLGQSAVTLSGGEAQRIKL
SKELSKRDTGKTLYILDEPTTGLHFHDIKQLLHVIHRLRDHGNTVVVIEHNLDVIKTADW
IIDLGPEGGAGGGEILVAGTPEQVADHKTSHTARFLKPLLQKS
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtattgaagtcagaggggcgcgcacacacaacctcaaagacattagtttaaca
atacctcgagataaactcgtggttattaccggtctttctggctcaggaaaatcttctctt
gcctttgatacgctttacgctgaagggcaacgccgttatgtcgagtcgctttcagcttat
gctcgtcaatttttatcgttaatggaaaagcctgatgttgatcatattgaaggtttatcg
ccggctatttctattgaacaaaaatcaacctctcataatccacgttcaaccgtaggaacc
accactgagatttacgattacttgcgtttactttatgcccgagttggtgagccgcgttgc
cccgagcatggtcaagcactcgcagcacaaacggtttcacaaatggttgataaggtttta
gcccttgaaaaaggcacaaaagtgatgctacttgctcctattgtccaagaccgtaaaggc
gaacatgtaaagctgcttgataacttagccgcacagggttttattcgtgtccgcattgat
ggtgaaatttgtgacttatccgatcctccgccattagaattacagaaaaaacacaccata
gaagttgtcgttgatcgtttaaaagtgcgtgatgagattcagttacgcctttctgagtct
tttgaaacaaccttagcgctaacctcaggtaccgccaaagtcgcttttatggatgagcca
gaccgagaagagttactgttctcggctaattttgcctgttcacattgtggttacagcatg
gaagaattagaaccgcgcttattctcctttaataatcccgccggcgcttgtcaaacctgt
gacggtttaggtattgaacaatttttcgatagtagtcgcgttatcgccaacgaaaaatta
agccttgctgacggtgctgtccgtggctgggacaaacgtaatttttattactttcaaatg
ctacaagcgttggccgaacattataactttaaagtggataaaccttttaaccgcttatcc
gcggaagcgcaaaaagttgttctttatggtagtggtaaacaagaaattgaatttaaatat
atgaacgaccgtggtgatgtggtgatgcgtaaacatccctttgaaggcatcatcaataat
atgcagcgccgctataaagaaaccgagtccaactcggtgcgtgaagagctaggcaaatat
cttaattcacatcattgtcctgactgtaatggtagtcgcttacggttagaggcccgtaat
gtctttattgatgatacgccgttaccggttatcgctgaattatccatcagtgatgccctc
acttttttccaaggtttgaccctcaccggtcaaaaaggccaagtagccgagaagatatta
aaagaaataaaccaacgtttaggctttctggttaatgttggccttaattacctaaattta
tcacgcggtgctaacaccctatcggggggtgaagcacaacgcatacgccttgcaagccaa
attggcgcaggcttagttggcgttatgtatgtactagatgagccctctattggcttacat
caacgagataatgaacgcttgcttagcaccttaatacacctgcgtgatttaggtaatacc
gttattgtggttgagcatgatgaagaggccattcgcgcggctgatcacatcattgatata
ggccctggggctggagtacatggcggtgaaattatcgtccaaggcacagtagaggatatt
ttagcctgtaaagagtcactcacgggtagatacctttctggcgtagaaagaattgaaata
ccaaaaaagcgtcatgcctttaataaaaaagccgtgatagagctaaaaggtgccagcggc
aacaacttaaagcatgttaatttagtgattccaaccggtttgatgacctgtattaccggg
gtttcaggctcaggaaaatcaacactcatcaacgacaccttgtacaaactcgctcatatt
gagctaaatggtgccaccattgatgaacctgccccctataaaagcattcacggtttagag
catttagataaagttatcgacattgatcaaagcccgattggtagaacgccacgttcaaac
ccggccacttataccggcatatttaccgcggtacgtgacatctttgccgccacacaagaa
tcacgttcacggggttataagtcaggacgttttagctttaatgttaaaggcggtcgctgt
gaagcttgccaaggtgatggcatgatcaaggttgaaatgcactttttacctgatgtttac
gtgccctgtgatgtctgtaagtgtaagcgctataaccgtgagaccttagaagtattgtac
aagggtaaaaatatccatcaagtattggatatgaccattgaagatgcctttgaattttac
caggccatcccgtcgataaagcgcaagttgcaaaccttaatggatgttggtttaagttat
ataaaattgggccaatcggcagtgaccctctctggtggtgaagcccagcgcattaaacta
tcaaaagagttatctaaacgagatactggcaaaaccttatatattttagatgagccgacc
acgggtttacattttcacgatatcaaacaattactgcatgttattcatcgattacgtgac
catggtaataccgtagtggtgattgagcataacttagatgtgataaaaactgccgactgg
atcattgatttaggcccagaaggtggtgccggtggtggtgaaatattagtggctggcaca
cccgagcaggtagctgatcataaaacctcacatacggcgagatttttaaaacccttactg
caaaaatcctaa
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