Corynebacterium pseudotuberculosis 31: CP31_01935
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Entry
CP31_01935 CDS
T02029
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
cop
Corynebacterium pseudotuberculosis 31
Pathway
cop03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cop00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CP31_01935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cop03021
]
CP31_01935
03400 DNA repair and recombination proteins [BR:
cop03400
]
CP31_01935
Enzymes [BR:
cop01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CP31_01935
Transcription machinery [BR:
cop03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CP31_01935
DNA repair and recombination proteins [BR:
cop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CP31_01935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
AFH90160
LinkDB
All DBs
Position
386235..389717
Genome browser
AA seq
1160 aa
AA seq
DB search
MAVSRQTKSVADIPGAPERFSFAKITEPIEVPGLLDIQLDSFAWLIGTPEWRARQQEELG
ESVRITSGLEEILEELSPIQDYSGNMSLSLSEPRFEDMKNTIDECKDKDINYSAPLYVTA
EFINNETQEIKSQTVFIGDFPMMTDKGTFIVNGTERVVVSQLVRSPGVYFDQTIDKSTER
PLHSVKVIPSRGAWLEFDVDKRDTVGVRIDRKRRQPVTVLLKALGWTTEQITERFGFSEI
MMSTLESDGVANTDEALLEIYRKQRPGEQPTRDLAQSLLDNAFFRAKRYDLAKVGRYKVN
RKLGLGGDNEGLMTLTEQDIATTLEYLVRLHAGESTMVAPNGDVIPVDTDDIDHFGNRRL
RTVGELIQNQVRVGLSRMERVVRERMTTQDAESITPTSLINVRPVSAAIREFFGTSQLSQ
FMDQNNSLSGLTHKRRLSALGPGGLSRERAGIEVRDVHASHYGRMCPIETPEGPNIGLIG
SLASYARVNSFGFIETPYRKVENGVLTDQIDYLTADEEDRFVVGQAHVEVDAQGKITADS
VTVRVKNGDIQVVAPESVDYLDVSPRQMVSVATAMIPFLEHDDANRALMGANMQRQAVPL
VRSEAPFVGTGMERCAAYDAGDLIINKKAGAVENVSADFITVMADDGTRETYMLRKFERT
NQGTCYNQIPLVNLGDRVEAGQVLADGPGTHNGEMSLGRNLLVAFMPWEGHNYEDAIILN
QRVVEEDILTSIHIEEHEIDARDTKLGAEEITREIPNVSEDVLKDLDERGIVRIGADVRD
GDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSMKVPHGETGKVIGVRRFSREDD
DDLAPGVNEMIRVYVAQKRKIQDGDKLAGRHGNKGVVGKILPQEDMPFMPDGTPVDIILN
THGVPRRMNIGQVLEVHLGWLAAAGWKIDPEDPANAELLKTLPEDLYDVPAGSLTATPVF
DGATNEEVAGLLANSRPNRDGDVMVDANGKAQLFDGRSGEPFPYPVSVGYMYMLKLHHLV
DEKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWAMQAYGAAYTLQELLTIKSDDVV
GRVKVYEAIVKGENIPDPGIPESFKVLLKELQSLCLNVEVLSADGTPMELSGSDDDEFDQ
AGASLGINLSRDERSDADIA
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
ttggcagtctcccgccagaccaagtcagtggccgacatccccggggctcccgaacgtttt
tcgttcgccaaaattacggaacctattgaggtcccgggacttcttgatattcagctagat
tccttcgcatggctcattggtacgcccgagtggcgtgctcgtcagcaggaggagctaggt
gaaagcgtccgcataaccagcggactggaagaaatcttggaggagctatctccgattcag
gattattccggaaacatgtcattgtctctctcggagccccgcttcgaggacatgaagaac
actatcgatgagtgtaaagacaaagacattaactattctgcgccgctttatgtgactgca
gaatttatcaataatgaaactcaggagatcaagtcccagactgtcttcatcggcgatttc
ccgatgatgaccgacaagggaaccttcatcgttaacggcactgagcgtgtcgtggtctcc
cagcttgttcgttcgcctggcgtttacttcgaccagacgattgataagtccaccgagcgt
ccgctgcactctgtgaaggtgatcccttctcgcggtgcgtggttggaatttgacgtggat
aagcgcgacaccgttggtgtccgtattgaccgcaaacgtcgccagccggtgaccgttctg
ctcaaggctcttggttggaccactgagcagatcacggagcgctttggtttctccgaaatt
atgatgtccacgcttgagtcggacggtgtggctaacaccgatgaggctctgctggagatc
taccgcaaacagcgtccgggtgagcagccgactcgtgacctcgcgcagtcgctgctggat
aacgccttcttccgcgcgaagcgttacgaccttgccaaggttggacgctacaaagtgaac
cgcaaactcggtctcggtggggacaacgagggtctgatgactctcactgagcaggacatc
gcaaccactctcgagtacctcgtgcgtctccacgctggtgagagcactatggttgcaccc
aatggtgatgttatccctgtggatacggatgacattgaccactttggtaaccgtcgtctc
cgtacagtcggagaactgattcagaaccaagtccgcgtgggtctgtcccgcatggagcgc
gtggttcgtgagcgcatgactacccaggacgcagagtctattactcctacctccttgatc
aacgtgcgcccggtttctgctgccatccgcgagttctttggtacctcccagctctcgcag
ttcatggatcagaacaactccttgtctggcctcacacacaagcgccgtctctctgctctg
ggcccaggcggcctgtcgcgtgagcgcgctggcattgaggttcgagacgttcacgcttct
cactatggtcgtatgtgcccgattgagactcccgaaggtccgaacattggtttgatcggt
tccttggcttcctatgctcgggtaaactctttcggcttcatcgagaccccctaccgcaag
gtggaaaacggtgttctcaccgatcagatcgattacctcaccgcagatgaggaagatcgt
tttgtggttggtcaggctcacgtcgaggtagacgcacagggcaagatcaccgcagatagc
gttactgttcgtgtgaaaaatggtgacatccaggtcgtggcaccggaaagcgttgattac
ctagacgtttccccacgccagatggtctctgtggctactgccatgattccgttccttgag
cacgacgacgctaaccgtgccctcatgggcgcgaacatgcagcgtcaggctgtgccgctg
gttcgttcagaagccccgtttgtgggaactggcatggagcgttgtgctgcttatgacgcc
ggcgacctcattatcaacaaaaaggctggcgctgtagagaacgtctccgctgatttcatc
accgtgatggctgatgacggcacccgtgagacctacatgctgcgcaagtttgagcgcacc
aaccagggcacctgctataaccagatcccattggtgaacttgggcgaccgcgttgaggcc
ggacaggttctcgcagatggccccggtactcacaacggtgagatgtcgctcggccgcaac
cttcttgttgcgttcatgccatgggaaggccacaactacgaggacgctatcatcctcaac
cagcgtgttgtggaagaggacattcttacttcgatccacatcgaggaacacgagattgat
gcccgagacaccaaacttggtgcggaggagatcactcgtgagattcccaatgtgtccgag
gatgtgctcaaggatctcgatgagcgcggcatcgttcgcatcggtgctgatgtccgcgac
ggcgatatcttggtgggtaaggtcactcctaagggtgagaccgagctgacccctgaagag
cgcctgctgcgtgcaatctttggtgagaaggcacgtgaggttcgcgatacctctatgaag
gtgcctcacggcgagaccggtaaggtcatcggcgttcgtcgtttctcccgtgaagacgat
gatgatctcgcgcctggcgttaatgagatgattcgtgtctatgttgcccagaagcgcaag
atccaggacggcgataagcttgctggtcgccacggtaacaagggtgtcgttggcaagatc
cttccgcaggaagacatgccattcatgcccgacggtaccccggttgacatcatcctgaac
acgcacggtgtgcctcgtcgtatgaacatcggccaggtgctggaagtccaccttggttgg
ttggctgctgccggttggaagatcgaccccgaggaccccgctaacgccgagctgcttaag
acgcttcctgaggatctgtacgacgttcctgctggttcgcttaccgcaacaccagtgttc
gacggtgctaccaacgaggaagttgcaggcctcctagccaattctcgtccaaaccgcgac
ggcgatgtcatggtggatgcaaacggcaaggcacagcttttcgacggtcgttccggcgag
cctttcccatacccagtgtctgtcggctacatgtacatgctgaagctgcaccacttggtt
gatgagaagatccacgcacgttctaccggcccttactccatgattactcagcagccgttg
ggtggtaaggctcagttcggtggacagcgcttcggcgaaatggaggtgtgggcaatgcag
gcttatggcgctgcctacacgcttcaggagcttctgaccatcaagtctgatgacgtagtc
ggacgtgtgaaggtctacgaggcaatcgttaagggcgagaacattccagatccgggtatc
cctgagtccttcaaggtgctcctcaaggagcttcaatcgctgtgcttgaacgtggaagtt
ctttctgcagacggcactccgatggagctgtccggttcggatgacgacgagttcgaccag
gccggtgcctcactgggcatcaacctgtctcgcgacgagcgttccgacgccgacatcgcc
taa
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