Coprobacter secundus subsp. similis: Cop2CBH44_29600
Help
Entry
Cop2CBH44_29600 CDS
T06867
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
copr
Coprobacter secundus subsp. similis
Pathway
copr00260
Glycine, serine and threonine metabolism
copr00460
Cyanoamino acid metabolism
copr00630
Glyoxylate and dicarboxylate metabolism
copr00670
One carbon pool by folate
copr00680
Methane metabolism
copr01100
Metabolic pathways
copr01110
Biosynthesis of secondary metabolites
copr01120
Microbial metabolism in diverse environments
copr01200
Carbon metabolism
copr01230
Biosynthesis of amino acids
copr01240
Biosynthesis of cofactors
copr04981
Folate transport and metabolism
Module
copr_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
copr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Cop2CBH44_29600 (glyA)
09102 Energy metabolism
00680 Methane metabolism
Cop2CBH44_29600 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Cop2CBH44_29600 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Cop2CBH44_29600 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Cop2CBH44_29600 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Cop2CBH44_29600 (glyA)
Enzymes [BR:
copr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Cop2CBH44_29600 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Beta_elim_lyase
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
BCI64607
UniProt:
A0A7G1I584
LinkDB
All DBs
Position
complement(3747252..3748532)
Genome browser
AA seq
426 aa
AA seq
DB search
MKRDNAIFDIIEKERQRQLKGIELIASENFVSEQVMQAMGSCLTNKYAEGYPGKRYYGGC
EIVDQSEQIAIDRLKEIFGAEWANVQPHSGAQANMAVFMAVLNPGDKFLGLNLSHGGHLS
HGSPVNFSGLMFQPLEYGVKEDTGYVDYDMMEEVALRERPKLLIGGASAYSREWDYARMR
KIADEIGAIFMIDMAHPAGLIAAGLLDNPLKYAHIVTSTTHKTLRGPRGGIILLGKDFDN
PWGKKTPKGEIKKMSALLDSAVFPGVQGGPLEHVIAAKAVSFGEALQPEYKEYQTQVKKN
AATMAAAFIDKGYKIISNGTDNHCMLIDLRTKFPELTGKVAEKALVQADITVNKNMVPFD
SRSPFQTSGIRVGTPAITTRGAKEDLMLEIVEMIDTVLSNPESESVIKSVREKVNETMKA
YPLFAY
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgaagagagacaatgccatctttgacatcatcgaaaaagaacgtcaaagacaattaaaa
ggaatcgagcttatcgcttcagaaaatttcgtaagcgaacaagtaatgcaagccatgggc
tcttgcctgacaaacaaatatgccgaaggctatcccggaaaacgttattatggcggttgc
gaaatagtagaccaaagtgagcaaattgccatagaccgtctaaaagaaatattcggagcc
gaatgggccaacgtacaacctcactccggagcacaagccaatatggctgttttcatggcc
gttttaaatcctggagataaattcctggggctgaacttgtctcacggtggacacctgtcc
cacggttctcccgttaatttttccgggctcatgttccaaccgttggaatatggagtaaaa
gaagacaccggatatgttgattatgatatgatggaagaagtagctttacgcgaacgtccg
aaattacttatcggtggtgcctccgcttactcccgcgaatgggattatgcacgtatgcgt
aaaattgccgatgaaatcggagctatcttcatgatcgatatggcacatcccgccgggctc
attgcagccggcttgctcgacaatccgttgaaatatgcacatatcgtaacatctaccact
cataaaaccttacgtggaccacgtggaggtattatcttgttaggtaaagattttgataac
ccatggggcaaaaagacacctaaaggcgaaatcaagaaaatgtcggctttgctcgattct
gcagtattcccaggtgtacagggaggcccgctcgaacatgtaatcgcagccaaagccgta
tcatttggagaagcattacagcccgaatacaaagaatatcaaacccaagtaaagaaaaac
gctgccaccatggctgccgcatttatcgacaaagggtacaaaattatttcaaacggaacc
gacaatcactgtatgttgatagacctccgcaccaaattccccgaactgacaggtaaagtg
gccgaaaaagcattggtacaggcagacattactgtaaacaagaacatggtaccgttcgac
agtcgctcaccgttccagacttcgggtatccgtgtcggaacaccggcaattactactcgc
ggggcaaaagaggatctcatgctcgaaatagtagaaatgatagatacagttctttccaat
ccggaaagtgaaagtgtcatcaaatctgtaagagaaaaagtaaacgagaccatgaaagct
tatcctctatttgcctattaa
DBGET
integrated database retrieval system