Commensalibacter melissae AMU001: D9V35_05670
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Entry
D9V35_05670 CDS
T05684
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
coq
Commensalibacter melissae AMU001
Pathway
coq00190
Oxidative phosphorylation
coq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
coq00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
D9V35_05670
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D9V35_05670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
coq03019
]
D9V35_05670
Enzymes [BR:
coq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
D9V35_05670
Messenger RNA biogenesis [BR:
coq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
D9V35_05670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
GCFC
Motif
Other DBs
NCBI-ProteinID:
AYN87017
LinkDB
All DBs
Position
complement(1238616..1240811)
Genome browser
AA seq
731 aa
AA seq
DB search
MIQKNRKNISNINHLTQNKITVKQSGRKIKQRNSIQISNNIKMDYERFINRELSWLDFNQ
RVVEEAENKHNPLLERVRFLSISASNLDEFYSVRVAGLTGQVREGLIALSPDGLTPAEQL
VAIQERVKGLFSDQQRIYHELIKLLSDSGIIVCKAEELNKEDLAWLHQFFMERIFPILTP
IALDPAHPIPFIPNLNLAIALRLISQNSSRKYVMILLPSQLLRFIPLPLSLCSNKIQRFV
LLEDLVRIFISSIFPGYKIANYGLLRVIRDTDVEFEEEAEDLVRSYETALKRRRRGVVIH
LDIDEHFPPKLGEIVAHALEVPPEEVTVHKGILGLVDVKQLIVDNRPDLLFPYYAPHLPA
RIRESAGDCFALLRSKDLLAYHPFESFDVVIQFLRQAAQDPQVLAIKQTLYRTSRDSPIV
KALIEAAENGISVTAIVELRARFDEEANIRLSRDLEAAGVQVVFGFADWKTHAKLSLVVR
REGGNIRSYAHFGTGNYHPITAKIYTDLSYFTCNAELTRDAAKLFNYVTGYARPDKMEKI
AFSPLTIRKTLNELIDDEIAFVNAGKPGAMWLKMNSLVDPQLIDKLYEASCAGVKINIIV
RGICCLRPGIKNLSENIFVKSIVGRFLEHARVFVFGNGYELPSRSAKVYMSSADWMERNM
DRRIEEMIPILPEDIHYKILNQLMVANLKDNMQSWQLGRDKKWKRLESSEPPFSAHNYFM
ENPSLDTRPLD
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgatccaaaaaaatcgtaaaaatatatcgaatatcaatcatttgacacaaaataaaatt
actgtgaaacagtcgggtcgtaaaattaagcagcgaaacagtattcagatatctaataat
atcaaaatggattatgagcgttttattaatcgggaattatcatggcttgattttaaccaa
agggtcgtagaggaagccgaaaataaacataatccacttttggaaagggtacgtttttta
tccattagcgcaagcaatcttgatgaattttattccgtacgtgttgcgggactgaccggt
caagtgagagaggggttgatagcactttctcctgatggtttaacacctgcagaacaatta
gttgccattcaggaaagggttaagggactatttagtgaccagcaacggatctatcatgaa
cttataaaattattgagtgactcaggtatcattgtttgtaaggcagaagagttgaacaag
gaagatctggcttggttacatcaattttttatggagcgtatttttccaatcctgacccct
attgccttggatcctgcccatcccattccatttataccgaatttaaatctcgcaattgct
ttaagattgattagccaaaatagcagccgcaaatatgttatgattttattgccgtcgcag
ctgttgcgttttatacctttgcctttatcgttatgtagcaataaaattcaaaggtttgtt
ttattggaggatttggttaggatatttatttcatcgatctttcctggatacaaaattgcg
aattatggcttgttacgcgttattcgtgatacagatgtcgaatttgaagaagaagcggag
gatctggtgagatcctatgaaacagccttgaaaagaagaagacgcggggttgtgattcat
ttggatatcgatgaacatttccctccaaaacttggtgaaatagttgcccatgctcttgaa
gtgcctccggaagaggtgacggttcataagggaatactgggattggtggatgttaagcaa
ctcattgttgataacaggccagatctcctttttccatattatgcacctcatcttcccgcg
cgtattcgggaaagtgccggggactgttttgccctgttacgttcaaaagatttgttggca
taccatcctttcgagagttttgatgttgtgattcagtttttgcgtcaggcggctcaagac
cctcaggttttagccattaaacaaactttatatcgaacatcccgggacagtcccattgtc
aaagctttaattgaggcagcagaaaatggaatttccgtaacagccattgttgaattaagg
gcccgttttgatgaagaagccaatattcgtctttcacgggatttggaggcagccggtgtg
caggttgttttcggttttgccgattggaagacccatgcaaaattgagtcttgttgttaga
agagaggggggaaacatacgctcttatgcccattttggcactggcaattatcatccgatt
acagcaaaaatttatactgatttatcctattttacctgtaatgccgaattaacgcgtgat
gcggccaaattatttaattatgtcacgggatatgcacgtcctgacaaaatggaaaaaatt
gcgttttcacctctaaccatccgtaaaaccttaaatgaattgattgatgatgaaattgct
tttgtaaatgcaggcaaaccgggtgcgatgtggcttaaaatgaattctcttgtggatcca
caattaattgacaaattatatgaggcgtcttgtgcaggtgtaaaaataaatataattgtt
cgaggaatttgctgtcttcgtccgggtatcaaaaatctttctgaaaatatatttgtcaaa
tcaattgttggccgttttcttgaacatgccagagtctttgtatttggaaacgggtacgag
cttccttcaagatcggctaaagtctatatgtcttctgcagattggatggaaagaaatatg
gatcgtcggatcgaggaaatgatacctattttgccagaagatattcattataaaatttta
aatcagttaatggttgcaaatctgaaagataatatgcagtcttggcaattggggagggat
aaaaaatggaaacgtcttgaatcttcggaacctcctttttccgcacataactattttatg
gagaatccctcgttggatacaagacctttggattag
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