Candida orthopsilosis: CORT_0A05580
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Entry
CORT_0A05580 CDS
T02488
Name
(RefSeq) hypothetical protein
KO
K12609
CCR4-NOT transcriptional complex subunit CAF120
Organism
cot
Candida orthopsilosis
Pathway
cot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CORT_0A05580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cot03019
]
CORT_0A05580
Messenger RNA biogenesis [BR:
cot03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
CORT_0A05580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_26
PH
Motif
Other DBs
NCBI-GeneID:
14537099
NCBI-ProteinID:
XP_003866385
UniProt:
H8WXZ8
LinkDB
All DBs
Position
1:complement(1228283..1231369)
Genome browser
AA seq
1028 aa
AA seq
DB search
MNAVKKRIASNQKGDGSPRNTESSSISDGRTLTSNAPPGGASDDFDLEGLSPELVPIVTL
LSSQSHRRYNEGIFMLYYDLNGDGKPADREWREVYGILTGNQLAYWDAAILAQFKNNADA
LLEVSAKPSYINFTDAVYSAMKTLPAAKQNLDNVVVVSTTLKNRYILQFKSVKDLETWYC
ALRLSSYEYNSLQAAYTGALLSARGSRLSDIRTILAEKRFDHEDWISIRYGSGMAWKRCY
AVVEPSTLKRKTFVPGRILLFENEQKKKKQLMAVITDASAVTAIYPQSHLLIDHSTMIKM
EGYINFSSPSLSTKVSKKNLEDFKHTSIFLMPEQHSAVPGFDTLIRFLVPLFDTFGLYGR
PKRLKANRNDVDSLLFGLPTLPRVHYLELSDIQQLVSRGSYISWDLRTWNLEIQNLLKSK
IERGYDGCGSQRGYAGAVSSLNSPALSSSPRLPSSGSASTFRRKEPSNLSRETTSQSGNF
VQPSSTQAAHPPPPPPHSDITAGGKRLDKNIKNLEVEVPAIPKKTVSTFDDHSSRQGGHL
VPEVATNPHASVQLAEIYQKYSDLKTPSDNYIDRREVLNGSQEQLIEDDLPLGIRQMNLA
SNTYPKNDDGLFSDEDEEESSQETDTGKSPNLLDVRTIGQNPSDSSVSVGSLRVPSLEQN
GSYSSVVSPMAQFNDLHDQYKKVGKSVPFYGLQTDSSPKNNSNREVDAKEQFGASLDNIA
RGFDQERPAFPQATESPQAVSVPYPTNRPRHIVSPNSSQNQLSKPLQSGAVREVASPVKK
DLQYPVSPQRKVPPSDSSTSSGDQPRTKTNIPKSNKQIFVPLGGQPGQERHQMHGNYPHQ
SSHSQASDFDRLRSENDSRRVGAKPLNQPGQQPLPQFQVSKPNQQVHPQSMGRQQTQPMG
RQQPSSMNPPMQYDNHQTRQPPAYHGNPQQHNTNMPVQPGPQRSPNMGVSNRQHIPNRPP
QQHNHTYQPSPYGQPNNFRSYDNQQYQYTPNIQSPGVQGNAAHNMNGPSGSKHPYAQYSR
SYNYDRTT
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctgtaaaaaaaagaattgcctcaaatcaaaagggtgatggatcccctagaaac
accgaaagcagcagtatcagcgatgggagaacattgacttcaaatgcaccacctggtggt
gctctggatgactttgatttagaagggttgtctccagaattggtgccaatagtcacctta
ttgtcatctcaatctcatagacgttacaacgaaggtatatttatgttgtattacgatctc
aatggtgatggaaaacccgctgatagagaatggcgtgaagtttatggaattttgactgga
aatcagttggcctattgggatgccgcaattttggctcaatttaaaaataatgccgatgct
ttattagaagtgtctgctaaaccaagttatatcaattttactgatgcagtttacagtgca
atgaaaactttgccagcagcaaaacaaaatttggataacgttgtagttgtctcaacaaca
ttgaaaaatagatatatattgcagttcaagtcagtcaaagatttggaaacttggtactgt
gctcttagattatcaagctatgaatacaactccctccaagcagcttataccggagccttg
ttatcagcaagaggttcacggttgtctgatattcgaacaattttggccgaaaagcgattt
gatcacgaggattggataagtataagatatggaagtggtatggcatggaaacgatgttat
gcagttgttgaaccatctaccttgaaaaggaagacatttgttcctggaagaattcttctt
tttgaaaatgaacagaaaaagaagaaacaattaatggcagtcattactgatgcatctgct
gtaacagccatatatccacaatcccatcttttgatagaccattcaacaatgattaaaatg
gaaggatatatcaacttttcttcaccaagtttgtcaactaaagtttcgaaaaagaattta
gaagatttcaagcatacttcaattttcttgatgcctgagcaacattctgctgttcctggg
tttgacacattgataagattcttggtgccattatttgatacatttggattgtatggaagg
ccaaagaggttaaaggcaaacagaaatgacgtagattcattgttgtttggtttaccaaca
ctcccaagggtacattacctagaacttctggacattcaacaattagtatcaagaggtagt
tatatcagttgggatttgaggacatggaatttggagattcaaaatttattaaagtctaaa
attgaaagaggttacgatggttgtggaagtcaacgaggatatgctggtgctgtaagttct
ctaaacagtccagccttatcaagttcacctcgccttccaagcagtgggagcgcactgaca
tttagaagaaaggagccatcaaacttgtcgcgagaaacgacgtcacaactgggaaatttt
gtgcaaccttcatcaacacaagctgcacatccaccaccgccaccaccacattcagatata
actgcaggtggtaaacgtttggacaagaatattaaaaacctcgaagtggaagttccagca
atacccaaaaagactgtttcaacttttgacgatcacagctcaaggcaaggcggtcaccta
gttcctgaggttgcaacaaatcctcatgcctctgtccagttagcggaaatttatcagaaa
tactcggatttgaaaactccatcggataattatattgatcgcagagaggtacttaatgga
tcacaagaacaattaatcgaggacgatttgccattgggaataagacagatgaatctcgca
agcaacacatatcccaaaaatgatgatggtttgtttagtgatgaggatgaagaagaaagt
ctgcaagaaacggatactggtaaactgccaaatttgttggatgtgcgaaccattggacaa
aatccaagtgactcgagtgtatctgtaggaagtttaagagtacccagccttgagcaaaat
ggcagttattcatctgtggtgtcacctatggcgcaattcaatgaccttcacgatcaatat
aagaaagtaggaaagagcgttcctttttacggtcttcaaacagattcttctcccaagaat
aactctaatcgagaagtggatgccaaagagcaatttggtgcaagtttagacaatattgcg
aggggatttgatcaagaacgtcctgcttttccccaagcaactgagagcccgcaagctgtc
agtgttccttatccaactaacaggcctagacacattgtatcacccaattcttcgcaaaac
cagcttagcaaaccgttacaatctggagcagtgcgagaagtggcatctccagttaaaaag
gatttgcaatatcctgtctcacctcagagaaaagtgccccccagtgactcttcaacaagt
agtggtgatcagccgagaactaaaacaaacataccaaagtcaaataagcaaatatttgtt
cctcttggtggacaacctggccaagagcgtcatcaaatgcatggaaactacccccatcaa
agctctcattcgcaagcttctgattttgaccgcttgagactggagaatgattctcgtagg
gtaggtgctaaaccattgaatcaacccggtcagcagcctttgcctcagttccaagtcagt
aagccaaatcaacaagtgcatcctcagctgatgggaagacaacaaactcagccgatggga
aggcaacaaccatcgtccatgaacccgccgatgcagtacgataaccatcaaacaaggcag
cctccggcataccatgggaatccgcaacaacataacactaacatgcctgtacaaccaggt
ccgcaaaggagtccaaatatgggagtttcgaaccgtcaacatatacccaaccgtccccca
cagcaacacaatcacacatatcaaccttcaccttacggacaacccaacaatttcaggagc
tacgacaatcaacaataccagtataccccgaatattcagtcgcctggcgttcaagggaat
gcagctcacaacatgaatggcccctcaggctctaagcacccatatgcacagtattcgagg
tcatacaactacgatcgaactacataa
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