Colwellia sp. Arc7-635: EKO29_01495
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Entry
EKO29_01495 CDS
T06022
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cov
Colwellia sp. Arc7-635
Pathway
cov03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cov00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EKO29_01495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cov03021
]
EKO29_01495
03400 DNA repair and recombination proteins [BR:
cov03400
]
EKO29_01495
Enzymes [BR:
cov01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EKO29_01495
Transcription machinery [BR:
cov03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EKO29_01495
DNA repair and recombination proteins [BR:
cov03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EKO29_01495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
AZQ82843
UniProt:
A0A3S9Q1L5
LinkDB
All DBs
Position
338617..339606
Genome browser
AA seq
329 aa
AA seq
DB search
MQGSVTEFLRPRLVDIETVSATRAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSSKEGVQEDIIEILLNLKGLAIKLEGKDEAVLTLTKSGEGPVTAADIQHDGD
VEIANPTHVICHLTGDGSISMRIKVEMGRGYVPASARRDAEEEDRAIGRLLVDASFSPVV
RIAYDVDSARVEQRTDLDKLVLDMETNGTLDPEEAIRRASTILAEQLDAFVELRDVTEVE
PKEEKPLFDPILLRPVDDLELTVRSANCLKAEAIQYIGDLVQRAEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLENWPPESIADND
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtaaccgaattccttagaccacgcttggttgatatcgaaactgttagc
gctactcgtgctaaagtaactttagaaccattagaacgtggttttggtcacactttaggt
aatgcgttacgccgcattcttttatcttcaatgccaggttgtgctgtaactgaagttgaa
attgacggtgtacttcatgagtacagcagtaaagaaggtgtccaagaggacatcatcgaa
atactgttaaaccttaaaggactagctataaagttagaaggcaaagatgaagccgttctt
actttaactaagtccggtgaaggccctgtaacggctgccgatatccaacatgatggtgat
gtagaaattgcaaatccaacacatgtaatctgtcatttgacaggtgatggctctatcagt
atgcgtattaaggttgaaatgggacgtggttacgttcctgcttcagcccgacgtgatgcc
gaggaagaagatcgtgcaattggacgtttgttagttgatgcttcattcagtcctgttgta
agaattgcctatgatgttgattccgcacgtgttgaacaacgtacagatttagacaaattg
gtcttagacatggaaactaacggtacgttagatcctgaagaagcaattcgtcgcgcttca
acaattttagctgaacagctagatgcgtttgttgagcttcgtgatgtgactgaagtagaa
ccaaaagaggaaaaaccactgtttgatcctattttgcttcgtcctgttgatgaccttgag
cttactgttcgttcagcaaactgcttaaaggcagaagcaattcaatatattggcgattta
gtacagcgtgctgaagttgagcttcttaaaacacctaatttaggtaagaagtctttaact
gaaatcaaagacgttttggcgtctcgtggtttgtctctaggtatgcgcctagaaaactgg
ccacctgaaagcatagctgataacgactaa
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