Colwellia sp. Arc7-635: EKO29_15635
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Entry
EKO29_15635 CDS
T06022
Name
(GenBank) DNA-3-methyladenine glycosylase 2 family protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
cov
Colwellia sp. Arc7-635
Pathway
cov03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cov00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EKO29_15635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cov03000
]
EKO29_15635
03400 DNA repair and recombination proteins [BR:
cov03400
]
EKO29_15635
Enzymes [BR:
cov01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
EKO29_15635
Transcription factors [BR:
cov03000
]
Prokaryotic type
Helix-turn-helix
AraC family
EKO29_15635
DNA repair and recombination proteins [BR:
cov03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
EKO29_15635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
OGG_N
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
AZQ85281
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All DBs
Position
3633282..3634712
Genome browser
AA seq
476 aa
AA seq
DB search
MLSIAVCENARLSRDIRFDGKFFTAVLTTGIFCRPICPARPPKPENVTYYESAELAQQSG
FRPCKRCFPQLAPSLPAPRKIKQITQAYYENNYNLQNCAEQLDISERQIRRLFVQYYGLP
PSEFFHQQRLLLAHKLLVSTSLSITNVAFTAGFNSIRRFNEVILQTYQTSPSEIRGKKTA
TSDQQVNVLLPYKAPFDWPLMLGFFRARKMSNIEGISTEHYFRTIELDDCRGWIKVTQHK
TKDALNLTVKLTDYSYLHQIIARVRRMFDLDADMQIIHQHLIKHPKLALVIEQFPGLRLP
GCWDIFEFSIRAILGQQISVKGATTLAQRIAEKYGENVADIAQTEDSSATKYFPSVQSLM
NVDYQDIGLTRSRIATLQTWVAYFKGNESIFTKGLTIEELEVALTALKGIGPWTVNYIGM
RGLSDPDAFPSADLGIIKALTFDDIKPKNKDILALAESWRPWRAYAAIYLWQSLAH
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgttaagtattgcagtatgtgaaaatgctaggttaagtcgtgatattcgttttgatggt
aaattttttactgccgtgctcactaccggtattttctgtcgtcctatttgtcctgctcga
ccaccaaagcctgaaaatgtcacctattatgaaagcgcagaattagcccaacaatcaggt
tttcgtccttgcaagcgttgctttcctcaattagcgccgagcttacctgcccctagaaaa
attaaacaaattacacaggcttactacgaaaataactacaatttacaaaactgtgcagag
cagctcgatatcagtgaacggcagattcgccgtttgtttgtgcaatattatggtttaccg
cccagtgagttttttcatcaacaacgcttactacttgcacataaactgcttgtttcaaca
tccttaagtattactaatgtcgcttttactgctggttttaatagcatacgtcgctttaac
gaagttattttgcaaacctatcaaacttccccaagcgagattagaggtaaaaaaactgca
acttctgaccaacaagtaaatgtattactaccttacaaagcaccttttgattggccatta
atgttgggatttttccgagcaagaaaaatgagtaatattgaaggtatcagcacagaacat
tattttcgtactatcgaactagatgattgcagaggctggattaaagtaacccagcataaa
actaaagatgcgttaaacctaacggtaaagttaaccgattatagttatttgcatcaaata
attgcgcgtgtgcgcagaatgtttgacttagacgctgacatgcaaataattcatcagcac
ttaattaaacatcctaaattagcgttagttatcgaacaatttcctggcttacgtttaccc
ggttgttgggatatctttgagttttctatccgggcaatcttaggccaacaaatttcagtt
aaaggcgcgacgacattagcgcaacgtattgctgaaaaatacggtgaaaatgttgccgat
atagcacaaacagaagacagctctgcgacaaagtactttccaagcgttcaatccttaatg
aatgttgattatcaagatattggtttaacacggtctcgtattgccactttgcaaacttgg
gtcgcttactttaaaggaaatgaaagtatttttactaaaggtcttactattgaggaactt
gaagttgcgttaacggcactaaaaggtattggcccgtggacggttaattacattggtatg
cgaggattaagtgaccctgatgcctttccaagtgcagatttaggcattatcaaagcatta
acctttgatgacattaaaccgaaaaataaagacatactagcattagcagaaagttggcga
ccttggcgcgcttatgccgctatttatctttggcagtcacttgcccattag
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