Colwellia sp. Arc7-635: EKO29_17895
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Entry
EKO29_17895 CDS
T06022
Symbol
ampD
Name
(GenBank) 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD
KO
K03806
N-acetyl-anhydromuramoyl-L-alanine amidase [EC:
3.5.1.28
]
Organism
cov
Colwellia sp. Arc7-635
Brite
KEGG Orthology (KO) [BR:
cov00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cov01011
]
EKO29_17895 (ampD)
Enzymes [BR:
cov01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.28 N-acetylmuramoyl-L-alanine amidase
EKO29_17895 (ampD)
Peptidoglycan biosynthesis and degradation proteins [BR:
cov01011
]
Peptidoglycan biosynthesis and degradation
Amidase
EKO29_17895 (ampD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amidase_2
Motif
Other DBs
NCBI-ProteinID:
AZQ85702
UniProt:
A0A3S9Q9T2
LinkDB
All DBs
Position
complement(4181943..4182545)
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AA seq
200 aa
AA seq
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MLKNNRPSNRSDNRSNNTEHAINNGWLTDAEIQPSSHFEPRDENESISLLVVHNISLPPG
QFGNNYVTDFFLGHLDPTIDPYFETIYNIRVSAHCLIKRNGDIVQYVSFHDKAWHAGVSR
YQDRDKCNDFSIGIELEGTDDIPYTKEQYQQLSQLSKTLIVAYPALKNNIVGHCDIAPGR
KTDPGAAFDWQHFRLTLERD
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaaataaccgaccaagtaatcgatcagataaccgatcaaataacacagaacac
gccattaacaacggttggttaactgatgctgaaattcagccgtccagccactttgaacca
agagatgaaaacgaaagtattagcttactcgttgtgcataatatttcactaccacctggg
cagtttggcaataattatgtcaccgatttttttcttggtcatttggatccaacaatagac
ccctattttgaaactatatataacattagggtctctgcacattgcctgattaaacgtaat
ggcgatattgtacaatatgtttcgtttcatgataaagcttggcatgctggcgtttctcgt
tatcaagatagagataaatgtaatgacttctctattggaatcgagctagaaggtactgat
gatattccatatactaaagagcaatatcagcagcttagtcagttaagtaaaacgttaatt
gttgcttacccagcattaaaaaataatattgttggtcattgcgatattgctcctgggcgt
aaaacagaccccggagcagcatttgactggcagcactttagattaacacttgaaagggat
tga
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