Chitinophaga oryzae: HF329_15745
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Entry
HF329_15745 CDS
T07451
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
coy
Chitinophaga oryzae
Pathway
coy01501
beta-Lactam resistance
coy01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
coy00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HF329_15745
01503 Cationic antimicrobial peptide (CAMP) resistance
HF329_15745
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
coy02000
]
HF329_15745
01504 Antimicrobial resistance genes [BR:
coy01504
]
HF329_15745
Transporters [BR:
coy02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
HF329_15745
Antimicrobial resistance genes [BR:
coy01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HF329_15745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QJB32692
UniProt:
A0AAE6ZID0
LinkDB
All DBs
Position
complement(4137072..4140266)
Genome browser
AA seq
1064 aa
AA seq
DB search
MFRKFIERPVLATVISILLVLLGILGLLTLPMSQFPDIAPPSVAVTASYPGANSEVVARS
VATPIEEAVNGVENMTYMTSTSNNDGSMTLNVYFRLGTDPDLAAVNVQNRVAKATSQLPA
EVIQAGISTQKVQNSMIMVVNLQSDKPEYNETFLQNYAKINIIPEIQRVKGVGQAMVFGA
KDYSMRIWLRPDRLTAYNMSPQEVLGAIRDQNLEAAPGRFGEGSQESFEYVIKYKGKLNK
DQQYEDIILRANPDGSVLRLKDVARVEFGSFTYGSDTKVNSKYGIGIAINQTAGSNANEI
QETINKLMEKSAKSFPTGIEYFNIYSTKEYLDESIDQVKHTLVEAFILVFIVVFIFLQDF
RSTLIPAIAVPVAIIGTFFFMKLFGFSINLLTLFALILAIGIVVDDAIVVVEAVHAKMEK
GANPRIATLSSMQEISGAIISITLVMSAVFIPVGFMEGPAGVFYRQFAFTLAIAILISAL
NALTLSPALCALILKNNHADHGQEHGKLNGHAPQPKSFGKRFFAAFNTGFNAMTEKYARS
LQFLIKRKWLTIGGLVIIGGVTFWMMRTTPSGFIPTEDQGFAVYAVTMPPGSSLERTRQV
VDKVEHIVKDLESTSSYLSVSGFNFLSNSSSATSGVGFIKLKPHADRGQIKNMDALMGML
QAKFAAIPEASIFVFNMPTVPGFSNVAGFEVVLQDRTGGSLDKLGGTAYGFIGELMKRKE
IAFAFTTFNNGHPQYEIEIDDRKAKQLGIAVSEILQTMQVYYGSMFASDFNRFGKYYRVI
VQADAEQRKDPGSLDGVYVKNQFGEMVPINTVVSLKRVYGPETVTRNNLFNAVTINGQAK
PGFSSGDAIKAVEEVAAQYLPRGYTYEWVGMTKEEISAGNQSTIIFTLCLIFVYFLLAAQ
YESYILPLAVILSIPLGIFGVFAFINMFGIDNNIYVQVGLIMLIGLLAKNAILIVEYAVQ
RRRSGMGLVASGIRAARLRLRPILMTSFAFIAGLLPLMRATGSSALGNRSISTGAAGGML
TGVVLGVFAIPVLYVIFQFLQEKISRKPIVTAEEKNAEIAELVH
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgtttagaaaattcatagaacggccagtattggctaccgttatatccatcctcctggtc
ttactgggaatactggggctgctgaccctccccatgagccagttcccggacattgcgcca
cccagcgtggcagtaacggcctcttatccgggcgccaactccgaagtggtggcccgttcc
gtggccacgcctattgaagaggcggtgaacggtgtggagaacatgacttatatgacctcc
acctccaacaacgatggttccatgacgctcaacgtgtatttccgtttgggcaccgatccg
gacctcgctgcggtgaacgtgcagaaccgtgtggccaaagccaccagccagttgcctgca
gaggtgatacaggcgggtatcagcacccagaaagtacagaacagtatgatcatggtggtg
aacctgcagagtgacaagccggagtacaatgagaccttcctgcagaactatgcgaagatc
aacatcatcccggagatacagcgcgtgaaaggggtaggccaggccatggtgtttggcgcc
aaagactactccatgcgtatctggttgcgccccgaccggctcacagcctataacatgtct
ccgcaggaagtgctgggcgctatccgcgaccagaacctggaagcggcccccggccgtttc
ggtgaaggcagccaggagtctttcgaatatgtgatcaaatacaagggtaagctcaacaaa
gatcagcagtatgaagacatcatcctgcgtgctaacccggacggttctgtgctgcgcctg
aaagacgtagcccgcgtggagtttggttccttcacttatggtagcgataccaaagtgaac
agcaaatacggtatcggtatcgcgatcaatcagactgctggttccaacgcgaacgaaatc
caggagaccatcaacaagctgatggaaaaatcagcaaagagtttcccgacaggtatcgag
tatttcaatatctacagcaccaaagaatacctggacgagtctattgaccaggtgaaacat
acactggtagaggcttttatcctcgtgtttatcgtggtgttcatcttcctgcaggatttc
cgttctacgctgatccctgcgatagccgtaccggtggccattatcggtaccttcttcttc
atgaagttgttcggcttctctatcaacctgctgacgttgttcgcgctgatcctggcgatt
ggtatcgtggtggatgacgccattgtggtggtggaggcggtccatgcgaagatggagaaa
ggggccaacccgcgtatcgccacgttgtcgtccatgcaggagatctccggtgccatcatc
tccattacgctggtgatgtctgccgtgtttatcccggtaggtttcatggaaggtcctgcg
ggcgtgttctaccggcagtttgcctttacgctggccatcgccatcctgatctcggcattg
aacgctttgacgctcagtcctgcgctttgcgccctgatcctgaagaacaaccatgccgat
catggacaggagcacggtaaactgaatggtcatgcaccgcagccgaaaagctttggtaaa
cgtttctttgccgctttcaataccggctttaacgcgatgaccgagaagtatgcgcgcagc
ctgcagttcctcatcaaacgtaaatggttaacgatcgggggactggtgatcatcggcggc
gttactttctggatgatgcgtaccacgccttccggctttattcccaccgaagaccagggc
tttgcggtatatgccgtgaccatgcctcccggttcttccctggaacgtaccaggcaggta
gtagataaagtggagcatattgtgaaagacctggagtctacgagctcttacctgagcgtg
tccggttttaacttcctcagcaactccagcagcgccacctccggtgtagggtttattaaa
ctgaagccgcacgccgatcgtggtcagatcaaaaatatggatgcactgatgggcatgttg
caggctaagtttgccgccattcccgaagccagcattttcgtgttcaacatgcctaccgtg
ccgggctttagtaacgtagccggttttgaggtggtattgcaggaccgtaccggcggatcg
ctggataaactgggtggtaccgcttacggatttatcggtgagctgatgaagcgtaaagag
attgctttcgccttcactactttcaataacggccacccgcagtatgaaatagaaattgac
gaccgtaaagccaagcagctgggtatcgccgtgagcgaaatcctgcagaccatgcaggtg
tattatggtagtatgtttgcgtctgacttcaaccgttttggtaagtactatcgcgtgatc
gtacaggccgacgccgagcagcgtaaagacccgggctcactggatggggtatacgtaaag
aaccagtttggagagatggtgcctatcaacactgtggtgtcactgaaacgcgtatacgga
ccggagaccgtgacccgtaacaacctgttcaacgccgttaccatcaatggccaggcgaag
ccgggcttcagtagtggcgacgccatcaaggcggtagaagaagtggccgcgcagtatctg
ccgagaggttacacctacgaatgggtgggcatgaccaaagaagagatcagcgccggtaac
cagtccaccatcatcttcacgctgtgtctgatattcgtgtacttcctgctggctgcgcaa
tacgaaagttatatcctgccgctggcggtgatcctctccataccgttgggtatcttcggt
gtgtttgcgttcatcaacatgtttggtatcgataacaatatatatgtacaggtaggctta
atcatgttgatagggctgctggcgaaaaacgccatcctgatcgtggaatacgcggtacag
cgaagacgcagtggcatgggactggtagcatccggtatccgtgcggcccgcctgcgtctg
cgccctattctgatgacgtccttcgcctttatcgcaggtctgttgccgctgatgcgcgct
accggatcgtccgcgctgggtaaccgttccatcagtaccggtgctgccggcggtatgctt
accggtgtagtgttgggcgtgtttgccatcccggtattgtacgtgatattccagttcctg
caggaaaaaatcagccgcaagccgattgtgacagcggaagagaagaacgcggagattgcc
gaactggtacactaa
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