KEGG   Carica papaya (papaya): 110809803
Entry
110809803         CDS       T05151                                 
Name
(RefSeq) SART-1 family protein DOT2 isoform X1
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
cpap  Carica papaya (papaya)
Pathway
cpap03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cpap00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110809803
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cpap03041]
    110809803
   04121 Ubiquitin system [BR:cpap04121]
    110809803
Spliceosome [BR:cpap03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    110809803
 Complex C
   U4/U6.U5 tri-SnRNP specific factors
    110809803
Ubiquitin system [BR:cpap04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    110809803
SSDB
Motif
Pfam: SART-1
Other DBs
NCBI-GeneID: 110809803
NCBI-ProteinID: XP_021891423
LinkDB
Position
Unknown
AA seq 904 aa
MDMDGHQDEREDMDSQMREHREGDLETEKSSKHRRKSKDHRSKDRSKKTSDDVSKDKEKG
VKDFEKDRVLSGDKRKEDRDEHDRDRSKDAKSRERDYERDKHREKEREREREKERERDRE
KDRKDKGKEKDRGKDRDVEETDRGRDKERGKEKSRERDKDKEREREKAKEKDREKNRERE
KQRDYEKDRDKERAKEKTREKDKEADKVKERLRDRDRTSKKAHEDVHESGKDEAENDNED
NGNRVEDEQVAKRTSGGVQVPTLELEERILKMRHERPTNKSQGVSEVLAWVNRSRKLEDK
RYAEKERALQLSKIFEEQENIVQEESENDEAGQNGTYNLAGVKVLHGIDKVMEGGAVVLT
LKDQNILADGDINNEVDMLENVEIGEQKRRDDAYKAAKKKTGLYDDKFNDDPGSEKKILP
QYDDPAADEGMTLDERGRITDEAEKKLEELRRKLQRPLTNRFEDLEPSSKISSDYYTHEE
MLQFKKPKKKKSLRKKEKLDIDALEAEAVAAGLGAGDLGSRNDGRRQAVREEQERYEAAL
RNNAYQSAYTKADEASKSLRLEQTLPVKVEEDENNVFAADDDDLHKSLERVRKLALKKQE
EPSSGPQAVALLATSTTSNQTTDDQNPTNRESQENMVVFTEMEEFVWGLQLDEEAHKPEG
EDVFMDEDEAPRASNQEIKDEVGGWMEVKDSVQDENPAEDDKEEVVPDETIHEVPIGKGL
SGALKLFKERGTLKESIEWGGRNMDKKKSKLVGIVDDDGNNDRFKDIRIERTDEFGRIMT
PKEAFRMISHKFHGKGPGKMKQEKRMKQYQEELKLKQMKNSDTPSLSVERMREAQARLKT
PYLVLSGHVKPGQTSDPTSGFATVEKDVPGSLTPMLGDKKVEHFLGIKRRAETGNGSTQK
KPKI
NT seq 2715 nt   +upstreamnt  +downstreamnt
atggacatggatgggcatcaagatgagagggaggacatggactcacagatgcgggagcac
agggagggggatttggaaacagaaaaatcgagtaagcatcggaggaaaagcaaggaccat
cgaagtaaagaccggtcgaagaaaaccagtgatgatgtttcaaaagacaaagagaaagga
gttaaagattttgagaaagatagagtgttgagtggggataagaggaaggaagatagagat
gagcacgatagagatcgaagcaaagatgctaagtcaagggaaagagactatgagagggat
aagcatcgggaaaaggagcgtgagcgggaaagggaaaaggagcgtgagcgggatagggaa
aaggatcgaaaggacaaagggaaagaaaaggatcgaggaaaggacagagatgttgaggag
actgatagggggcgagataaggagcgaggtaaggaaaagagtcgggagagggacaaagat
aaggaaagagaaagagagaaggcgaaggaaaaggatcgagaaaaaaatagggaaagagaa
aagcaaagggattatgaaaaggatagagataaggaaagggctaaagagaaaacaagagaa
aaggataaggaagcagataaagtgaaagagagattgagagatagagatcgaacaagcaag
aaagctcatgaagatgtccatgagagtggtaaggatgaagcggaaaatgacaatgaagat
aatgggaatagggttgaagatgaacaagttgctaagcgtacatctggtggagtacaagtg
ccaacgttggagcttgaggagcgcattttgaagatgagacacgaaagacccacgaacaag
tctcagggtgtttctgaggttttagcatgggtgaacaggagtcgtaagcttgaggataaa
agatatgctgaaaaagagagggccttgcagctctcaaagatttttgaagagcaggaaaat
attgtccaagaggaaagtgaaaatgatgaggctggccagaatggtacttacaatctggct
ggggttaaagttctacatggtatcgacaaagtaatggaaggtggagcagttgttttgact
ctcaaagatcagaatatccttgctgatggtgatattaacaatgaggttgatatgcttgaa
aatgtggaaattggagagcagaagcgacgagatgatgcatataaagctgcaaagaaaaaa
acagggttgtatgatgataagttcaatgatgatcctggttcagagaaaaagatacttcca
caatatgatgatccagctgcagatgagggcatgactctggatgaaagaggacgtattaca
gatgaagcagagaagaagctagaagagcttcgtagaaaattacagcgtcctttaactaat
cgtttcgaagatcttgaaccctctagtaagatctcctcagattattacactcatgaggaa
atgcttcaatttaaaaagcccaagaaaaagaaatcgttgcggaagaaagaaaaattggat
atagatgcacttgaagcagaagcagttgccgcaggattgggggctggggatctcggttct
cgtaatgatgggaggagacaagctgttagggaggagcaagagcgatatgaggctgcattg
cggaataatgcataccagtcagcatatactaaagcagatgaggcatctaaatcactgcga
ctggagcaaactcttcctgttaaagtggaggaagatgaaaataatgtgtttgctgctgat
gatgatgatcttcataaatctttggaaagagttaggaaattggcccttaaaaagcaagaa
gagccttcatctggtcctcaagcagttgcacttcttgcaacctccaccaccagcaatcaa
actacagatgatcagaaccctacaaatagggagtcacaagagaatatggtagtctttaca
gagatggaagagtttgtctggggcctccagcttgatgaagaagcccacaagcctgagggt
gaagatgtcttcatggatgaagatgaagcaccaagagcttctaatcaagaaataaaagat
gaagttggtgggtggatggaagttaaagacagtgttcaagatgaaaaccctgctgaagat
gataaggaggaggtagttccagatgaaaccattcatgaggttccaattggcaaaggatta
tcaggtgcattgaaactgttcaaggagcgaggaacactcaaagaaagtattgagtggggt
gggagaaacatggacaagaaaaaaagcaaacttgtgggaatcgtagatgatgatggaaac
aatgacagattcaaggatattcgcatagagaggactgatgaatttgggcgaattatgact
cccaaggaagcctttcgaatgatttctcacaagttccatggtaaggggcctggcaaaatg
aagcaagaaaagcgtatgaaacaatatcaagaagagttgaagttgaaacaaatgaaaaac
tcagatacaccgtcactttctgtagagaggatgagagaagctcaagctcgattaaagacg
ccctatcttgtcctcagtggtcatgtgaaaccaggtcaaaccagtgatccaactagtggt
tttgctaccgttgagaaggatgttccagggagcttgacaccaatgcttggtgataaaaag
gtagaacatttcttggggataaagcgcagggctgagactgggaacggaagcacacaaaag
aagccaaaaatctga

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