KEGG   Carica papaya (papaya): 110811241
Entry
110811241         CDS       T05151                                 
Name
(RefSeq) LOW QUALITY PROTEIN: probable splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
cpap  Carica papaya (papaya)
Pathway
cpap03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cpap00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110811241
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cpap03041]
    110811241
Spliceosome [BR:cpap03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    110811241
 Complex B
    110811241
 Complex C
   U2 SnRNP specific factors
    110811241
SSDB
Motif
Pfam: Surp PRP21_like_P ubiquitin
Other DBs
NCBI-GeneID: 110811241
NCBI-ProteinID: XP_021893359
LinkDB
Position
Unknown
AA seq 577 aa
MLGALPILPLEAPPADGNIGPLPPSQVTEPVKDETNEDQNKTNSAPASVATHTRTIGIIH
PPPDIRNIVDKTAQFVAKNGLEFEKRIIANNANNAKFNFLSSSDPYHAYYQHRLTEFRAQ
NQASAQQPPSESADSVPKELAPAAPAAADANEAVAKPDITAQFRPPVRKPLEPPEAEQYT
VRLPEGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFTFFTALA
DAYSKVLMPPKGLTEKLKKNITDMTTVLERCLHRLEWERSQEQARQKAEMRXRAERMQMA
MIDWHDFVVVETIDFADDEDEDLPPPMTPPPPGLALNLPRVPPNTVQYAPPTSGGIPVPH
QPRPIGIQMIPSIRQPPLPMQAGQPPIMVNRPPSMPPPIPVNLPGIPVPPPPGSQFTPVS
VPRSYVPLPVAPPSMSMMQPPPLPQGIPPPPPPDEAPPPLPEEPEPKRQKLDDSMLIPED
QFLAQHPGPVRITVSVPNIDEGQNLKGQVLEITVQALSETVGSLKEKIAGEIQLPANKQK
LSGKAGFLKDNMSLAYYNVGAGETLALSLRERGGRKR
NT seq 1734 nt   +upstreamnt  +downstreamnt
atgcttggagcattaccaattttgcctcttgaggcccctcctgctgatggaaatatcggt
cctcttcctccttcccaagtaacggagccagtcaaggatgagaccaatgaggaccaaaac
aaaactaattcagctcctgcctccgttgcaacccacacaagaaccattggaatcatacat
cctcccccagacatcagaaatattgttgataaaactgctcaattcgttgcaaaaaatggg
ctggaatttgaaaagaggatcattgccaacaatgctaacaatgcaaagttcaactttctt
agtagctcggatccataccacgcatattaccagcataggctgactgaatttcgtgctcag
aatcaagcttctgcccagcagcctccatcagagtctgcagattctgttccaaaggaactg
gcaccagctgccccagctgctgctgatgcgaatgaagctgtagcaaaacctgatattaca
gctcagttcagacctccggtacgcaagcctcttgagccacccgaggctgagcagtatact
gttcgacttcctgaaggaattactggggaagaactggatattattaagcttacagctcag
tttgttgcaagaaatgggaaatcattcttgacaggattgacaagtagagagataaataat
ccacagttccattttttgaagccaacacatagtatgttcaccttctttactgcacttgct
gatgcatattcaaaggtgttgatgccccctaagggtttaacagagaaactgaagaagaat
attactgatatgacaactgtacttgaaaggtgcttgcatcgcctggagtgggaacgttca
caggagcaggcaaggcagaaagctgagatgaganntagagcagagaggatgcaaatggct
atgattgattggcatgattttgttgtggttgagaccatagattttgctgatgatgaagat
gaagatttacccccacctatgacacccccaccaccaggacttgcattgaatcttcctcgt
gtacctccaaacacggtccagtatgcacctccaactagtggtggaatcccagtacctcat
cagcccaggccaattggtatccagatgattccatcaattcgccaaccgccattacctatg
caagctgggcaacctccaattatggttaatcgaccaccatcaatgcctccgccaattcct
gtgaatttgcctggtattcctgtaccaccacctccaggttctcagtttactcctgtctct
gttccccgatcgtatgttcctcttccagttgctcctccttctatgtctatgatgcagcca
ccacctttgcctcaaggaatacctccaccacctccaccagatgaagctccaccaccactt
cctgaagaaccagaaccaaagagacagaagcttgatgattctatgcttattccagaagac
cagtttcttgctcaacatccgggacctgttcgcatcactgtatctgttcccaacattgat
gaggggcaaaatctcaagggccaagttcttgagattacagtgcaagccctgtctgaaact
gttggtagtttgaaagagaaaattgcaggggagatacaacttcctgcaaacaaacagaaa
ttgagtggaaaagctggttttcttaaggacaacatgtcacttgcatattacaatgttgga
gcaggagaaacgcttgcactctctctgagagaacgtggtggtagaaagagatga

DBGET integrated database retrieval system