KEGG   Carica papaya (papaya): 110817670
Entry
110817670         CDS       T05151                                 
Name
(RefSeq) cyclin-H1-1 isoform X1
  KO
K06634  cyclin H
Organism
cpap  Carica papaya (papaya)
Pathway
cpap03022  Basal transcription factors
cpap03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cpap00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    110817670
  09124 Replication and repair
   03420 Nucleotide excision repair
    110817670
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cpap03021]
    110817670
   03400 DNA repair and recombination proteins [BR:cpap03400]
    110817670
Transcription machinery [BR:cpap03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     110817670
DNA repair and recombination proteins [BR:cpap03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     110817670
SSDB
Motif
Pfam: Cyclin_C_2 Cyclin_N TFIIB RB_B
Other DBs
NCBI-GeneID: 110817670
NCBI-ProteinID: XP_021901994
LinkDB
Position
Unknown
AA seq 330 aa
MADFQTSTHRSKWIFTPQQLVEKYKAANQKAMHMIEKYGTTQMEVDVDGSLSYPAPQANA
RDNGDKHSRPKPLSFEEEKFLRVFYEAKLREVCSAFFFPHKIQATALIYFKRFYLQWSVM
QHHPKHIILTCVYAACKIEENHVSAEELGKGIQQDHQMILNYEMAVLQSLEFDLIVYAPY
RSVEGFVNDMEEFNRAKDEEIERLRDLHETAKLEVDKIMLTDAPLLFSPGQLALAALRTA
NEVHRVLDFERYLSSIVSCQNSAHAVSELTKFLDAIDSLVKSYKFPTEKDMKHINRKLKS
CWGHNAHEDKKREKKSKHKSYRSSHETQNA
NT seq 993 nt   +upstreamnt  +downstreamnt
atggctgatttccaaacctcgactcaccgatccaagtggatatttactcctcaacaactg
gtcgagaaatataaagctgctaatcaaaaagcaatgcacatgattgaaaagtatggtaca
acacaaatggaagtagatgttgatggttcgttatcctacccagcacctcaagctaatgcc
agagataatggtgacaagcattctcgtccaaagcctcttagttttgaggaagaaaagttt
ttgcgagtgttttatgaggctaaacttcgagaagtatgcagtgcttttttctttcctcat
aaaattcaggcgacggctctcatatacttcaaaaggttttatttgcaatggtcagtcatg
caacatcacccaaaacacataatattaacgtgtgtatatgcagcctgtaagatagaagaa
aatcatgtatctgcggaggagcttggaaaagggattcagcaagatcatcagatgattctt
aattatgagatggctgttcttcagagtttggaatttgatctaattgtttatgctccgtat
cgatctgttgaagggtttgtcaatgatatggaggaattcaatcgagcaaaggatgaagaa
attgaaaggctgagagatttgcatgaaactgcaaaattggaagttgataagatcatgcta
actgatgcgccacttttgttttctccgggacagttggcattggctgctttacggactgct
aatgaggtgcacagggttcttgattttgagagatatctgagcagcatcgtctcttgtcaa
aattctgcacacgctgtttcagaacttaccaaatttttagatgccatagattctttggta
aagagctataaattcccaactgaaaaggatatgaagcacataaaccgcaagttaaaatct
tgttggggtcataatgcacatgaagataagaaacgggagaagaagtccaagcacaagtcc
tacaggagttcacatgaaacacaaaatgcttaa

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