KEGG   Carica papaya (papaya): 110820087
Entry
110820087         CDS       T05151                                 
Name
(RefSeq) LOW QUALITY PROTEIN: THO complex subunit 7A-like
  KO
K13176  THO complex subunit 7
Organism
cpap  Carica papaya (papaya)
Pathway
cpap03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:cpap00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    110820087
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cpap03019]
    110820087
   03041 Spliceosome [BR:cpap03041]
    110820087
Messenger RNA biogenesis [BR:cpap03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     110820087
Spliceosome [BR:cpap03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    110820087
SSDB
Motif
Pfam: THOC7 YwqH-like M
Other DBs
NCBI-GeneID: 110820087
NCBI-ProteinID: XP_021905161
LinkDB
Position
Unknown
AA seq 241 aa
MLVKGRKISGRGETVALNYAFDPAEDEIIIKHRLLTRTTTTRGEPPLKKLQKKFTSFALE
IEKDEDNFNDCARLSKAFLQELSTFEIPLLKSQAVIEANLREKENFNELKSETNRQILQA
QADIEDLKKQLEESKIERQHKEECEATRKLISAQPPRSETQKIIRELEKEIAELEAENTA
SQRLLELRKKQFALLLHVVDELQNTIEEEQKSLVEELRMTAEEQKNLLEDANGSSEAMAI
D
NT seq 726 nt   +upstreamnt  +downstreamnt
atgttggttaaaggaaggaaaatttccggcaggggggagacagtggcattaaattatgct
tttgatccggctgaagatgagataatcataaaacataggcttctgacccgcaccactacc
accaggggcgaacccccattgaaaaagcttcagaagaagttcacctcatttgcacttgag
atcgagaaggatgaggataacttcaatgactgtgcaagactttccaaggctttcttacag
gaactgtccacttttgagatcccactcctcaagagccaagcagttattgaggcaaatctt
agagaaaaggagaatttcaacgagttgaaatctgagacaaataggcagattttgcaagca
caagctgatatagaagatctaaagaaacagcttgaggagagtaaaattgaaagacagcac
aaggaggagtgtgaggcgaccaggaaattgatttctgcacagccacccagatcagaaacc
caaaagatcataagagagcttgagaaagaaattgcagaattggaggctgagaatactgcc
agtcaaaggcttttggaacttcgcaagaaacaatttgctctgttattgcatgtggtggat
gagttgcaaaataccatagaagaagagcaaaagagcttagttgaagagcttagaatgacg
gctgaagaacaaaagaatctattagaggatgctaatgggagctcagaggccatggccatt
gattag

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