KEGG   Carica papaya (papaya): 110823248
Entry
110823248         CDS       T05151                                 
Name
(RefSeq) splicing factor SF3a60 homolog
  KO
K12827  splicing factor 3A subunit 3
Organism
cpap  Carica papaya (papaya)
Pathway
cpap03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cpap00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110823248
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cpap03041]
    110823248
Spliceosome [BR:cpap03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    110823248
 Complex B
    110823248
 Complex C
   U2 SnRNP specific factors
    110823248
SSDB
Motif
Pfam: SF3a60_Prp9_C SF3A3 SF3a60_bindingd LLPH Desulfoferrod_N
Other DBs
NCBI-GeneID: 110823248
NCBI-ProteinID: XP_021909291
LinkDB
Position
Unknown
AA seq 443 aa
MSSTLLEVTRAAHEEMERLERLIVKDLQTDPTTNKDRLFQSHRVRNMIDTITVTTEKLID
IYEDKDSARKDEIAALGGQTATGTNVFSAFYDRLKEIREYHRKHPAARVVDANEDYEALL
KEEPVIEFSGEEAMGRYLDMHELYNQYINSKFGEPIEYSAYLDVFSEPDKIPRKLKFTRQ
YKEYMENLLEYLIYFFQRTEPLQDLDRIFSKVVTDFEEQWENFQDTPLEKLDKKHFTKSS
WGLEHNGLAAPPQEVNNSKDIALMEAKMRKLCDLLDETIVRTKENVEKKQALTYEEMEAE
REEEETQVDTESDDEDQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNYSYWG
RRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWKRIQERQGVNKWRPDLEEE
YEDQEGNIYNKKTYTDLQRQGLI
NT seq 1332 nt   +upstreamnt  +downstreamnt
atgtcgtcgacgctgctggaggtgactcgtgcggctcatgaggagatggagcgacttgaa
cggctcatcgtgaaggatctgcagactgacccaaccacgaataaggaccgcttgttccag
agccaccgagttcgtaacatgatagataccatcactgtcactactgagaaacttattgat
atctatgaagataaagatagtgcaaggaaggatgagattgcggctcttggtggccaaact
gcaactgggacaaatgtgtttagtgcattttatgatagattgaaagagattcgtgaatac
catagaaagcatcctgctgctcgtgttgttgatgctaatgaggattatgaggcacttctt
aaggaggaacccgtgattgagttcagtggagaggaagcaatggggcgatacctagacatg
catgaattgtataatcagtacattaattccaaatttggagaaccaattgaatactccgca
taccttgatgttttttcagaaccagataaaattcctcgcaagctgaagtttacaaggcag
tataaagaatatatggaaaacctactggagtatttaatatacttttttcaaaggacagag
ccattgcaagatcttgatagaatattttcaaaggttgtgactgattttgaagagcaatgg
gaaaattttcaggacacgcctttagaaaaactagataagaaacattttactaaaagttca
tggggattggaacacaatggcctggctgcacctccacaggaagttaacaactcaaaggat
attgccttgatggaggccaagatgagaaagctctgtgatttattggatgagacaattgta
cgaacaaaagaaaatgtcgagaagaaacaggcattaacatatgaggaaatggaagcagaa
cgtgaggaggaagagactcaggttgacactgaaagtgacgatgaagaccaacagatatat
aatccccttaaattgcctatgggttgggatgggaagcctataccttattggttatataag
cttcatggtcttggccaggaatttaaatgtgagatatgcggaaactacagttactgggga
cgtagggcttttgagcgacattttaaggaatggcgccatcaacatggaatgcgttgcctt
ggtattcccaatacgaagaattttaatgagataacatccattgaggaagcaaaggaattg
tggaaaaggatacaagaacggcagggagttaataagtggcgtccggatcttgaggaagaa
tacgaagaccaggagggtaacatttacaacaaaaaaacttacactgatttgcaacgccaa
ggactgatctga

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