Clostridium pasteurianum DSM 525 = ATCC 6013: CLPA_c19550
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Entry
CLPA_c19550 CDS
T03753
Symbol
hfq
Name
(GenBank) RNA-binding protein Hfq
KO
K03666
host factor-I protein
Organism
cpat
Clostridium pasteurianum DSM 525 = ATCC 6013
Pathway
cpat02024
Quorum sensing
cpat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CLPA_c19550 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CLPA_c19550 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpat03019
]
CLPA_c19550 (hfq)
03036 Chromosome and associated proteins [BR:
cpat03036
]
CLPA_c19550 (hfq)
Messenger RNA biogenesis [BR:
cpat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CLPA_c19550 (hfq)
Chromosome and associated proteins [BR:
cpat03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
CLPA_c19550 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
Hfq_1
LSM
Motif
Other DBs
NCBI-ProteinID:
AJA52013
UniProt:
A0A0H3J9W0
LinkDB
All DBs
Position
2095186..2095437
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AA seq
83 aa
AA seq
DB search
MMNKATNNLQDIFLNGSRKNKIPVTIHLTNGFQLRGNVKGFDSFTVIIDSDGKQMMIYKH
AISTITPLKPILFNQNLEEETRE
NT seq
252 nt
NT seq
+upstream
nt +downstream
nt
atgatgaataaagccacaaataatctacaggatatatttttaaatggttcaagaaagaat
aaaataccagttacaattcatttgacaaatggatttcaacttaggggaaatgtaaaggga
tttgatagttttacagtaattattgattctgatgggaagcaaatgatgatttacaaacat
gctatttcaactattactcctttaaagccaatattatttaatcaaaacttagaggaagaa
acaagagaatag
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