Chaetura pelagica (chimney swift): 104387363
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Entry
104387363 CDS
T08631
Name
(RefSeq) sodium channel protein type 2 subunit alpha-like isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpea04040
]
104387363
Ion channels [BR:
cpea04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
104387363
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
IQCJ-SCHIP1
ATP-synt_B
HB_ELP1
Motif
Other DBs
NCBI-GeneID:
104387363
NCBI-ProteinID:
XP_009994403
LinkDB
All DBs
Position
Unknown
AA seq
2017 aa
AA seq
DB search
MAQALLVPPGPESFRYFTRDSLAAIEKRSAEEKAKKPKQEHTDDDDENGPKPNSDLEAGK
TLPFIYGDIPPGMVSEPLEDLDPYYINKKTFIVLNKGKAIFRFSATSALYILTPFNPIRK
IAIKILVHSLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFC
LEGFTFLRDPWNWLDFSVILMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPDNSTFEINIISYFNSTM
DENGTLVNMSVSTFNWKDYIEDETHFYILEGQRDALLCGNSSDAGQCPEGYICVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATMEEAEQKEAEFQQMLEQLKKQQEEAQATAAIAAASVASRDFSGVG
GLGELLESSSEASKLSSKSAKERRNRRKKRRQKEMSEAEDKGVTEKFPKSESEDSIRRKS
FRFSTEGSQLTYEKRFTSPHQSLLSIRGSLFSPRRNSKTSIFSFRGRAKDIGSENDFADD
EHSTLEDNESRRDSLFVPNRHGERRNSNISQASVSSRMVPALPVNGKMHSTVDCNGVVSL
VGGPSTLTSPTGQLIPEVIISKSGTTTETEIRKRRLSSYQISMEMLEDSAARQRAMSIAS
ILTNTMEELEESRQKCPPCWYRFANTFLIWDCWSPWLKVKHVVNLIVMDPFVDLAITICI
VLNTLFMAMEHYPMTEQFSSVLSVGNLVFTGIFTAEMVLKIIAMDPYYYFQEGWNIFDGI
IVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLA
IIVFIFAVVGMQLFGKSYKECVCKISSDCELPRWHMHDFFHSFLIVFRVLCGEWIETMWD
CMEVAGQTMCLIVFMLVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVAR
IQKGIDYIKKKIQEFIQKAFVRKEKALEEIKALEELNNKKDSCISNHTAVEISKDLNHLK
DGNGTTSGVGTGSSVEKYVIDESDYMSFINNPGLTVTVPIAVGESDFENLNTEEFSSESD
MEESKQKLNASSSSEGSTVDIAPPGEGEQAEIESEEALEPEACFTEGCVQKFPCCQVSIE
DGKGKIWWNLRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADK
VFTYIFILEMLLKWVAYGFQIYFTNAWCWLDFLIVDVSLVSLIANALGYSELGAIKSLRT
LRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYYHCV
NTTTGEMFHVSEVNNYTQCEELIKNNQTARWKNVKVNFDNVGAGYLALLQVATFKGWMDI
MYAAVDSRDVEDQPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQD
IFMTEEQKKYYNAMKKLGSKKPQKPIPRPVNKFQGMVFDFVTKQVFDISIMILICLNMVT
MMVETDDQSKEMETILSRINLVFIILFTGEFVLKLISLRHYYFTIGWNIFDFVVVILSIV
GMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLL
FLVMFIYAIFGMSNFAYVKREVGIDDMFNFETFGNSMLCLFQITTSAGWDGLLAPILNSG
EPDCDPHRDHPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESA
EPLSEDDFEMFYEVWEKFDPDATQFIEYSKLSDFAASLDPPLLLAKPNKVQLIAMDLPMV
SGDRIHCLDILFAFTKRVLGESGEMDALRIQMEDRFMAANPSKVSYEPITTTLKRKQEEV
SAVIIQRAYRRHLLRQKVKKVSSIYNKNKNKEGDGLVIKEIIIDKLNGNSTPEKTDESSS
TTSPPSYDSVTKPDKEKYEKDKAEKNYKGKDVRENKK
NT seq
6054 nt
NT seq
+upstream
nt +downstream
nt
atggcacaggcactgctggtaccaccaggacctgaaagcttccgctattttaccagagat
tctctcgcagctatcgaaaagcgttctgcagaagaaaaagctaaaaagcccaagcaagaa
catacagatgatgatgatgaaaatggtccaaaaccaaacagtgacttggaggcaggaaag
acactgccatttatttatggtgacatacctccaggaatggtatctgaacctttggaagat
ctggacccatattatatcaataaaaaaactttcatagtattgaataagggaaaggcaatt
ttccgattcagtgccacatctgccttgtacattttaactccttttaatcccatccgaaaa
attgctatcaagattttggtacattcattattcagcatgcttattatgtgcactattttg
acaaactgtgtatttatgaccatgagtaaccctccagactggacaaagaatgtagagtac
actttcactggaatatatacctttgaatcacttataaaaattcttgcaaggggcttctgc
ttagaaggttttacttttctgcgagacccatggaactggcttgacttcagtgtcatttta
atggcatatgtgacagagtttgtggacctgggcaatgtctcagcgttgagaacattcaga
gttctccgagctttgaaaacaatatcagtcattccaggcttgaagactattgtaggagcc
ctaattcaatccgtgaagaagctctcagatgttatgatcctgactgtgttttgtctgagc
gtatttgcactaatagggctgcagttgttcatgggcaacttgaggaataaatgcctgcag
tggcctccagacaattctacatttgaaataaacattatttcctactttaatagcacaatg
gatgaaaatggcacattagttaatatgtcagtgagcacatttaactggaaggattacatc
gaagatgaaactcatttttacattttggaaggacaaagagatgctctactttgtggtaat
agctctgatgcagggcagtgtccagagggatatatatgtgtgaaagctggtagaaacccc
aactatggttatacaagttttgacaccttcagttgggcttttttgtcactctttcggcta
atgactcaggacttctgggaaaatctgtatcagctgacactacgtgctgctgggaagaca
tacatgatcttttttgttctggtgatttttctgggctctttctacctgatcaacttgatc
ctggctgtggttgccatggcctatgaagaacagaatcaagcaaccatggaagaagcagag
cagaaagaggcagaatttcaacagatgctggaacaactgaagaagcaacaagaagaagct
caggcaacagcagcaatagcagcagcatctgttgcatcaagagatttcagtggtgtaggg
ggactaggagaactcttggaaagttcttcagaagcatcaaagttgagttcaaagagtgct
aaagaacgaagaaacagaaggaagaaaagaagacagaaagaaatgtctgaggcagaggac
aaaggagttactgagaagttccccaagtctgagtccgaagacagtatcaggaggaaaagt
ttccgcttctccacagaaggaagtcaactgacatatgaaaaaaggttcacatctccccac
cagtctttgctgagcattcgtggctccctgttttccccaaggcgcaacagcaaaacaagc
attttcagtttcagaggtcgagcaaaggatataggatctgaaaatgattttgctgatgat
gagcacagcactcttgaagacaatgagagcagaagagattctctctttgttccaaatcga
catggagaacggcgcaacagtaacattagtcaggcgagtgtgtcgtctagaatggtacca
gcccttccagtaaatgggaagatgcacagcactgtggattgcaatggagtggtttccttg
gttggaggaccttcaactctaacttcacctactggtcagcttataccagaggtaattata
agtaaatcagggaccactacagaaacagaaataagaaaaagaagactgagttcttatcaa
atttccatggaaatgctggaagattctgctgcaagacaaagagcaatgagtatagccagc
atacttacaaatacaatggaagagcttgaagaatccagacagaaatgccctccatgctgg
tacagatttgcaaatactttcttgatctgggattgctggagtccatggttaaaagtaaaa
catgtcgtcaatttaattgtgatggatccatttgttgatcttgctataaccatttgcatt
gtcttaaacaccttgtttatggccatggaacattaccccatgactgaacagtttagcagt
gtcctttctgtgggaaacctggtattcactgggatattcacagcagaaatggtactaaaa
ataattgccatggacccttattattatttccaagagggctggaatatttttgatggtatt
atcgttagccttagtttaatggagcttggtcttgcaaatgttgaaggattatctgttctt
cgatcattcagattgcttcgagttttcaaattggcaaaatcttggccaacgctaaatatg
ctgattaagattattggcaactcagtgggggctctggggaatctgaccctggttctggcc
atcattgtgttcatttttgctgtggttgggatgcagctgtttgggaaaagctacaaggaa
tgtgtctgcaagatctctagcgactgtgaactcccacgctggcacatgcatgactttttc
cactctttcttgattgtattccgagtgctgtgtggagaatggatagaaacaatgtgggat
tgtatggaggttgcaggccaaaccatgtgccttattgttttcatgctggtcatggtgatt
ggaaacctggtggtattgaacctgtttctggccttgctgctgagctcatttagttcagac
aaccttgctgctactgatgatgataatgaaatgaacaatctacagattgctgtggcaagg
attcagaagggaatagattatattaaaaaaaagatccaggagttcatccaaaaagccttt
gttagaaaggagaaagctttagaggaaatcaaagcacttgaagagctcaacaacaagaaa
gacagctgcatttccaatcatactgctgttgaaataagcaaagatctgaatcatctgaaa
gacgggaacggaaccacaagtggtgtaggcacaggcagcagtgtggaaaaatatgtaatc
gatgaaagtgattacatgtcattcataaacaacccaggcctcactgtgacagtgcccatt
gcagttggagaatcagattttgaaaatttaaatacagaagaatttagcagtgaatctgat
atggaagaaagcaaacagaaactaaacgcctccagttcatcagaaggcagcacagttgat
attgcccctcctggagagggcgagcaagcagaaattgaaagtgaagaagctcttgaaccg
gaagcctgttttacagaaggttgcgtgcagaaatttccatgttgtcaagtaagtatagag
gatggcaaaggaaaaatttggtggaatctcagaaaaacctgctacagtatagttgagcac
aactggtttgagaccttcattgtcttcatgattcttctcagcagtggagcactagctttt
gaagatatatatattgaacagcggaaaactatcaagacaatgctcgaatatgctgacaaa
gtttttacatatatttttattttggaaatgcttttaaaatgggtagcatatggttttcaa
atatattttactaatgcctggtgctggctggacttcctgattgttgatgtctcattggtt
agtttaatagccaatgctttgggctattctgagcttggtgccattaaatcacttcggaca
ttaagagctttaagacctttaagagccttgtcacgatttgaaggaatgagggtggttgta
aatgcccttgtaggagcaattccatctatcatgaacgtattgctggtttgtcttatattc
tggctcatcttcagcatcatgggagtaaatctgtttgctggcaagtactatcactgtgtc
aacaccacaactggtgagatgtttcatgtcagtgaagtcaacaactatactcagtgtgag
gaactcataaaaaacaatcaaactgcccgatggaaaaatgtgaaagtaaacttcgataat
gtaggagctggatatcttgctctgcttcaagtagctactttcaaaggatggatggatatt
atgtatgctgctgttgattcacgggatgtagaagatcaacctaagtatgaagacaacctg
tatatgtatctttattttgtcatcttcattatatttggatcattctttaccttgaatctt
tttattggtgtcattatagacaacttcaaccaacaaaaaaagaagtttggaggtcaggat
atatttatgacagaagaacagaagaaatattacaatgcaatgaaaaaactgggatctaag
aagccacagaaaccaataccaaggccagtgaacaaattccaaggcatggtctttgatttt
gtaaccaaacaagtatttgacatcagcatcatgatactcatctgccttaacatggtcaca
atgatggtagaaacagatgaccagagtaaagaaatggaaacaattttatcccggattaac
cttgtgttcattatccttttcactggagaatttgtcctgaagttgatttcacttcgccat
tactacttcactataggctggaatatttttgattttgtggttgtgattctctccatagtg
ggtatgttcttagcagagatgattgagaaatattttgtatcccccacactcttcagagtc
atccgacttgccagaatcggtcgaatcctgcgtctcattaagggcgctaaggggatccgc
actctgctttttgctctcatgatgtctcttcctgctttgttcaacattggtctgctgctc
ttcctggtcatgtttatctatgcgatatttggcatgtccaactttgcctatgttaagagg
gaagttggaattgatgacatgttcaactttgaaacctttggcaacagcatgctctgcctt
tttcaaattaccacatctgctggctgggatggtttgctggccccaattcttaacagtggg
gagccagattgtgacccccatagagatcatccagggagttctgtgaaaggtgactgtggg
aacccttctgttgggattttcttctttgtcagctacattatcatatcatttctggtagtg
gtgaacatgtacattgctgtcattttggagaacttcagtgttgctactgaagaaagtgct
gaacccttgagtgaggatgactttgagatgttctatgaagtttgggagaagtttgatcct
gatgcaacacaattcatagaatatagtaagctgtcagactttgcagcttcattagatcct
cctcttcttttagcaaaaccaaacaaagtccagcttattgcaatggacctgcccatggta
agcggtgacagaattcactgcttggacatcctgtttgctttcacaaagcgtgttttgggg
gaaagtggggagatggatgccctgagaatacagatggaagatcggtttatggcagccaat
ccttcaaaagtgtcctatgaaccaatcacaactacattaaaacggaaacaggaggaagta
tctgctgtcattattcaacgggcttacagacgtcaccttttaaggcaaaaagtcaaaaag
gtgtctagcatttataacaaaaataaaaacaaagaaggagatggactagttataaaagag
ataattattgataaactaaatgggaactccactccagaaaaaacagatgagagttcctct
acaacttctccaccttcctatgacagtgtaacaaagccagacaaagaaaaatatgaaaaa
gataaagcagaaaaaaactacaaaggtaaagatgtcagggaaaataaaaaataa
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