Chaetura pelagica (chimney swift): 104393755 Help Entry 104393755         CDS       T08631                                  Symbol COL9A1 Name (RefSeq) collagen alpha-1(IX) chain   KO K08131   collagen type IX alpha Organism cpea  Chaetura pelagica (chimney swift) Pathway cpea04510   Focal adhesion cpea04512   ECM-receptor interaction cpea04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:cpea00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     104393755 (COL9A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     104393755 (COL9A1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     104393755 (COL9A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00535 Proteoglycans [BR:cpea00535]     104393755 (COL9A1) Proteoglycans [BR:cpea00535]  Extracellular matrix (ECM) proteoglycans   Others    104393755 (COL9A1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen Laminin_G_2 Laminin_G_3 Motif Other DBs NCBI-GeneID:  104393755 NCBI-ProteinID:  XP_010001580 LinkDB All DBs Position Unknown AA seq 921 aa AA seqDB search MKMKSNWKITAFFYMCSFLWSFISATIQQQSRLPVILGASQRTDLCPTIRIGQDDLPGFD LISQFQIEKAASQGIIQRVVGSTSSQVAYKLGPNVDFRIPTSAIYSNGLPDEYSFLTTFR MTGATLQKYWTIWQIEDSSGKEQVGVHLNGQMKSVEFSYKGADGNLRTASFLHLPFLFDS QWHKLMISVEANSVTLFIDCIKIESLNIKPKGKINFDGFAVLGKLKNNPQISVPFEIQWM VIHCDPLRPQREGCDELPSQVSQTVIERGLPGPPGPPGPPGPPGVPGIDGIDGERGPNGP PGPPGPDGDAGKPGSPGLPGEPGADGLTGPDGSHGATGPKGQKGEPGLPGARGLPGKGLL GPPGPAGAAGLPGEVGRAGPPGDPGKRGPPGPPGPPGPRGTIGLQDGDPLCPNACPPGRP GHAGLMGMKGQKGSKGESGEPGKQGYKGEEGDQGPSGEVGAQGPPGILGTRGITGLMGLK GTKGARGLDGDPGPRGLPGAPGDQGQRGPLGEAGPKGERGPQGTRGINGLPGPKGEPGLP GVDGREGIPGMPGAKGEPGKPGAPGDAGLQGLPGLPGSPGVKGIPGPKGNRGPPGVPGLM GNSGKPGERGPEGEAGPTGPRGPPGSRGEPGPAGPLGLPGKWGPQGAIGLPGLPGPPGLP GGKGDRGSVGEPGPKGEQGAPGAEGDGGEKGDLGDMGLPGVKGTVGNPGEPGSRGPEGSR GLPGMEGPRGSPGPRGLQGEQGAPGLPGSQGPAGKEPTDQHIKQVCLRVMQEQLAQLAAS LRRPEFGAPGLPGRPGPPGAPGPAGENGFPGQLGPRGLPGLKGPPGEIGRKGPKGEPGER GERGFPGRGLKGYPGPRGLPGEPGKASYGQEGRDGERGLPGAAGQPGVPGPPGPPGPPGY CEPASCRVQAGQRAGKNMKGP NT seq 2766 nt NT seq  +upstreamnt  +downstreamnt atgaagatgaaaagcaactggaaaattacagctttcttttacatgtgtagttttctgtgg tctttcatctcagccaccatccaacaacaatcaagactaccagtcattctgggtgccagt cagagaactgatctctgcccaacgatcaggattggtcaagatgacttaccaggctttgac ctgatttctcagttccaaatagaaaaagctgcttcccaaggaattatccagagagtagtg ggctccacttcttcacaagtggcttataaattgggacccaatgtagacttcaggatccca accagtgccatttattccaacggattgcctgatgaatactcctttctaactacttttcgg atgactggggccacacttcagaaatactggactatatggcagattgaggattcttcagga aaagaacaagttggagtgcatcttaatggtcagatgaaaagtgttgaattttcttataaa ggagcagatggaaatctccgaactgcatcatttttgcatttgcctttcttgtttgactcc caatggcataagcttatgataagtgtggaagcaaacagtgtcacactttttattgactgt attaaaatagaatccttaaacataaaaccaaaagggaaaatcaactttgatggctttgct gtgctcggaaaacttaaaaataatcctcaaatatcagttccgttcgaaatccagtggatg gtgattcactgcgaccctctgcgtccccagcgcgaaggctgcgacgagcttccctcgcag gtaagccagacggtaatcgagagaggtctccctggtccaccaggtcccccaggtccacca ggtccaccaggagttcccggtattgatggcattgatggggaacgaggtccgaatggcccc cctggcccaccgggtccagatggggatgcaggcaaaccaggatcccctggcctgcctgga gagccaggtgctgatggactcacaggacctgacgggtcacatggagccacaggaccaaag ggacagaagggtgagccaggactgccaggtgctcgtggacttccaggcaaggggcttctt ggaccacctggtccagctggtgcagcaggtcttcctggggaagtaggtcgtgctggtcca cctggagatccaggaaaaagagggccaccaggaccaccaggaccaccaggtcctcgggga actattggcctgcaagacggtgacccattgtgccccaatgcttgcccacctggccgccca ggacatgctggcttaatggggatgaagggtcagaaaggttcaaaaggagaatctggtgaa ccaggaaaacaaggttacaagggtgaagaaggggaccaaggacccagtggggaagtggga gctcaaggccctccaggcatcctaggtaccagaggtataactggtctaatgggacttaaa ggcaccaaaggagctcgtgggcttgatggcgatcctggtccccgaggtcttcctggtgca cctggggatcaaggacagagaggtccactgggagaggcaggtccgaaaggagaaaggggc cctcaaggtacaagaggaataaatggcctccctgggcctaaaggagagcctggcttacca ggagttgatggccgggaagggatccctggaatgcctggagcaaaaggtgaaccaggaaaa cctggagctccaggtgatgcagggcttcagggactgccaggtttgccaggctctccaggt gtgaaaggcattcctggtccaaagggtaatagaggtccccctggggtgccaggtttgatg ggaaattccggtaaaccaggtgaacgagggccagagggagaagcaggtcccacaggaccc cgaggaccaccaggtagcagaggagagccaggtcctgcaggtcctctgggtttaccaggg aaatggggtccccagggtgctattggacttcctggactgccaggtcctccaggcctacct ggtggtaagggtgaccggggctcagtgggtgaaccaggacctaagggtgaacaaggtgca cctggagcagaaggagatggaggagaaaagggtgacttaggtgatatgggattaccaggg gtaaagggaactgttggtaatcctggagagcctggttcccgtgggcctgagggaagccgg ggactgcctggcatggaagggccacgaggctcacctggcccacgaggcttgcagggtgaa cagggtgccccaggtctgcctggcagccaaggcccagctggaaaagaaccaaccgatcag cacattaagcaggtttgccttagagttatgcaagaacaactagctcagctggcagccagt cttaggaggccagaatttggtgctccaggtcttcctggccgaccaggaccaccaggtgct ccagggcctgctggtgaaaatggcttcccaggacagcttgggcctcgtggtttacctggt cttaaaggtccccctggtgagattggccgtaaaggtcctaaaggtgaaccaggagaacga ggagaaagaggatttccaggcagaggactgaaaggttaccctggaccaagaggtcttcca ggtgaaccaggcaaggccagctatggccaggaaggccgtgatggtgagcgaggcctgcct ggggcagccggtcagcctggggttcctggtcctcctggccctcctggccctcctgggtac tgtgagccagcgtcttgcagagtgcaggcaggacagagggctggtaagaacatgaagggg ccatga

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