Cucurbita pepo subsp. pepo (vegetable marrow): 111779301
Help
Entry
111779301 CDS
T05351
Name
(RefSeq) probable pectate lyase 8 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep00040
Pentose and glucuronate interconversions
cpep01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111779301
Enzymes [BR:
cpep01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
111779301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
111779301
NCBI-ProteinID:
XP_023515191
LinkDB
All DBs
Position
LG17:complement(1587696..1592242)
Genome browser
AA seq
448 aa
AA seq
DB search
MAALSKWSSLSLLALAMVFFVTMALVRKEEVSEIRTVLATKFQSSINSSMATRAVNDDSE
ELNNEHAVDNPDEIAASVEMSIRNSTERRKLGFFSCGTGNPIDDCWRCDPNWHHKRKRLA
ECGIGFGRNAIGGRDGRFYVVTDSSDNDPVNPKPGTLRHAVIQEKPLWIVFKRDMVIQLK
QELIMNSFKTIDARGVNVHIANGACITIQFVTNIIIHGLHIHDCKPTGNAMVRSSPTHFG
WRTMADGDAISIFGSSHIWIDHNSLSNCADGLVDAVMGSTAITISNNHFTHHNEVMLLGH
SDSYTKDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINS
QGNRYAAPTNPFAKEVTKRVETAENEWKGWNWRSEGDMLLNGAYFTPSGAGASASYARAS
SLGAKSASMVASITSSAGSLPCRRGHPC
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggcggcactcagcaaatggtcttctctgtctctgcttgcgcttgcaatggtgttcttc
gtaacaatggctctggttcgcaaagaagaggtctctgaaattaggactgtgttagcgacg
aagtttcagagctctatcaactcatcaatggcgactagggcggtgaatgatgattcggag
gagcttaacaatgagcatgctgtggataatcctgacgagattgctgcctctgttgagatg
agcatccgtaacagcactgaaaggagaaaattgggatttttctcctgtggaactggcaat
cccattgatgactgttggcgttgcgaccccaattggcaccacaaacgtaaacgcctagct
gaatgtggcattgggttcggccggaatgctatcggtggtcgtgatggtcgtttctacgtt
gtcactgattcaagcgacaacgatccggtgaacccgaagccagggactcttcgtcatgct
gtcattcaagagaaacctctttggatcgtattcaaaagggacatggtgattcaattgaaa
caagaactcatcatgaacagttttaagaccattgatgctcgcggggtcaatgtacacatc
gccaatggcgcttgcatcacaatacagtttgtgaccaatatcattatccacggtcttcac
atccatgattgcaagcccacaggaaatgccatggtgagaagctctccaactcattttggg
tggagaaccatggctgatggcgatgccatttccatctttgggtcaagccatatatggatc
gaccacaattcactctctaattgtgccgatggccttgttgatgctgtcatgggctcaact
gcaatcaccatctccaacaatcacttcacccaccacaatgaggtgatgcttctaggccat
agtgattcctacacaaaggacaagcaaatgcaagtcaccattgcttataaccattttgga
gagggactcattcaaagaatgccaagatgtaggcatggctatttccatgtggtgaacaat
gactacactcattgggagatgtatgccattggtgggagtgcaaaccccaccatcaatagt
caaggaaacagatatgctgctccaaccaacccttttgccaaggaggtgaccaaacgagtt
gaaacagcagagaacgaatggaaagggtggaactggagatcagaaggagatatgctgctg
aacggtgcttatttcaccccatcaggcgctggagcttcagcaagctatgcgagagcctcc
agcttaggagccaaatctgcttccatggttgcctccatcacttcttcagcaggttcgctc
ccttgccgccgaggccatccctgctag
DBGET
integrated database retrieval system
