Cucurbita pepo subsp. pepo (vegetable marrow): 111786720
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Entry
111786720 CDS
T05351
Name
(RefSeq) CCR4-NOT transcription complex subunit 1-like
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111786720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpep03019
]
111786720
Messenger RNA biogenesis [BR:
cpep03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111786720
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
111786720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
Motif
Other DBs
NCBI-GeneID:
111786720
NCBI-ProteinID:
XP_023522716
LinkDB
All DBs
Position
Unknown
AA seq
323 aa
AA seq
DB search
VSILFAEWYRICELPGGNEAAFNHFILQLHQNGLLKGDDVADRFFRLLTEISVAHCLSSE
VINSGALQSPQQTQNLSFLAIDIYAKLVFSILKGSGKTALLSRILAVTVRFIQRDAEEKK
ASFNPRPYFRLFINWLPDLGSLEPIVDGANFQILTAFANAFHALHPLKIPAFSYAWLELV
SHRSFMPKMLTGNSQKGWPYIQRLLVDMFQFMEPFLRNAELGPPVHFLYKGTLRVLLVLL
HDFPEFLCDYHFTFCDMIPPSCIQMRNIILSAFPRNMRLPDPSTPNLKIDLLAEINQSPR
ILSEVDGALKSKQMKADVDEYLK
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaatattatttgctgaatggtatcgaatatgtgagcttcctggtggtaatgaagct
gcatttaaccatttcatactacaattacatcagaatggacttctgaaaggggatgatgtg
gctgaccggtttttccgtctgctcacggaaatttctgtggcacattgcttatcatcagaa
gtaattaactcgggtgcattacaatctccacaacaaacacagaatctatctttccttgca
attgatatttatgccaagcttgtattttcgatcttgaagggatctggcaaaactgctctt
ttatcaaggattctggcggtgaccgtaagattcattcagagagatgccgaggagaagaaa
gcatcatttaatccaagaccatattttagattgtttattaactggcttcctgaccttgga
tctctagaacctattgttgatggtgccaactttcagatattgacagctttcgctaatgca
tttcatgcgttgcaccctcttaagattccagcgttcagctatgcttggcttgagttggtt
agtcatagaagttttatgccgaagatgcttaccgggaatagtcagaagggttggccttat
atccagcgcttgctagtagacatgtttcaattcatggagccatttttgcggaatgctgaa
cttggaccaccggttcattttctttataaaggcactcttagggtattgctagtgttactt
catgatttccctgagttcctatgtgactatcattttactttctgtgatatgattcctcct
agctgcattcagatgcggaatatcatccttagtgcgtttcctcgaaacatgagacttcca
gatccttctactcccaacttgaagattgacttgctggccgaaatcaatcaatccccacgt
attctatcagaggtggatggagctcttaaatcaaagcagatgaaggccgatgtggatgag
tatctcaag
DBGET
integrated database retrieval system
