Cucurbita pepo subsp. pepo (vegetable marrow): 111787704
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Entry
111787704 CDS
T05351
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep00040
Pentose and glucuronate interconversions
cpep01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111787704
Enzymes [BR:
cpep01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
111787704
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GFIT
Motif
Pfam:
Pec_lyase_N
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
111787704
NCBI-ProteinID:
XP_023523501
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Position
LG02:6145450..6147295
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AA seq
437 aa
AA seq
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MAGFRTLFVFSLLYFVAACTDANVDDHDEYWLTRANEAKKVAQDAYNPNPESVTEHLNVA
VHLAIVGDNSTRRSLNKYKGPCLKTNPIDRCWRCDKNWAKNRKKLAECPLGFGHQTIGGK
RGRIYVVTDASDDNLVDPKPGTLRYGVIQKGPLWIIFGRSMVIRLAQELMISSDKTIDAR
GFNVHIAYGAGLTIQFAHNVIIHGLHIHNIISKSGGYIRDSVDHYGFRTQSDGDGISIFG
SSHVWIDHVSMYACQDGLIDAIMGSTGITISNSHFTHHNEAMLFGASDSYKEDEIMQITL
AFNHFGRGLVQRMPRCRFGFFHVVNNDYTHWLMYAIGGSQHPTIVSQGNRFIAPQNINAK
TITKREYADESEWKKWSWRSEGDLFLNGAVFVGSGDQTKGKKKDLTRYDMISFKPGSYVK
RLVRFAGTLECRVGKPC
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggccgggtttagaacgttgttcgtcttctcgttgttgtactttgtcgcggcatgtacc
gatgccaatgtcgatgaccatgatgaatattggctcactcgtgctaatgaggctaagaaa
gtagcccaagatgcctacaatcctaacccagaaagcgtcactgagcatttgaacgtcgcc
gtccatctggcaatagtgggtgacaatagtacaagaaggagtctcaataaatataaagga
ccatgtttgaagacaaacccgatcgatagatgctggagatgcgataaaaattgggctaag
aatcgaaagaagctagctgagtgcccgttagggttcggccaccaaaccatcggcggaaag
agaggacgcatctacgtggtgaccgacgcatctgatgataacttggttgacccgaagcca
ggaaccctccgctatggcgtgattcaaaaaggtccactttggatcatttttggacgtagc
atggtcatccggctagcacaagagctgatgatctcaagcgacaagaccatcgatgctcgt
ggctttaatgtacacattgcctatggcgctggcctcaccattcaattcgcccacaatgtt
atcatccatggccttcacatccataatatcatctccaaatccggtggctatattagagat
tccgttgatcattatggatttagaacacaaagcgatggcgatggtatctccatcttcggc
tcttctcatgtatggatcgaccatgtttccatgtatgcatgccaagacggcctcatcgat
gccatcatgggttccactggcatcaccatttccaatagtcatttcactcatcacaacgag
gctatgttattcggagcaagcgatagctacaaagaggacgagatcatgcaaataacgctc
gcattcaaccacttcgggaggggattagtgcaaagaatgccaaggtgtagatttgggttc
ttccatgtggtgaacaatgactacacccattggctaatgtatgccatcggaggtagccag
catccaaccatcgtgagccaaggcaaccgattcattgcgccacagaacatcaatgcaaaa
acgataacaaagagagagtatgcagatgagagtgagtggaagaagtggtcgtggagatcg
gaaggggatttgtttctgaatggtgcggtgtttgttgggtcgggagaccaaaccaaaggg
aagaagaaggacttgacgaggtatgacatgatttcgttcaagccagggtcttatgtgaag
agacttgtacgcttcgcgggaacacttgaatgtcgtgtaggcaaaccatgctag
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