Cucurbita pepo subsp. pepo (vegetable marrow): 111788383
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Entry
111788383 CDS
T05351
Name
(RefSeq) chaperone protein ClpB1
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
cpep03110
]
111788383
Chaperones and folding catalysts [BR:
cpep03110
]
Heat shock proteins
HSP100
111788383
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
Clp_N
AAA_5
AAA_22
Sigma54_activat
AAA_16
bpMoxR
ATPase_2
nSTAND3
AAA_18
AAA_14
AAA_7
IstB_IS21
RuvB_N
TniB
AAA_28
TsaE
DUF815
NACHT
NBD_SMAX1
RNA_helicase
Mg_chelatase
Zeta_toxin
AAA_25
AAA_19
Torsin
ResIII
ABC_tran
T2SSE
DNA_pol3_delta2
DUF2987
DUF87
DASH_Spc19
Motif
Other DBs
NCBI-GeneID:
111788383
NCBI-ProteinID:
XP_023524480
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All DBs
Position
LG02:complement(9546767..9550468)
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AA seq
909 aa
AA seq
DB search
MNPDKFTHKTNEALAGAHELALNSGHAQLTPLHLAVALISDPSGIFSQAISSSGGENAQK
EVETVFNRALKKLPSQSPAPDEVPASTTLIKVIRRAQAAQKSRGDTHLAVDQLVLGLLDD
SQIGDLLKEAGVTTAKVKSEVEKLRGKEGKKVESASGDTTFQALKTYGRDLVEQAGKLDP
VIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLIDVRLIA
LDMGALVAGAKYRGEFEERLKAVLKEVEDAEGKVILFIDEIHLVLGAGRTEGSMDAANLF
KPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTISILRGLKERYEG
HHGVRIQDRALVVAAQLSSRYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERRR
MQLEVELHALEKEKDKASKARLVEVRRELDDLRDKLQPLLMKYRKEKERVDEIRRLKQRR
EELQIALQEAERRYDLARAADLRYGAIQEVESAIARIEGNTDENLMLTETVGPEQVAEVV
SRWTGIPVTRLGQNEKERLVGLAERLHKRVVGQNQAVDAVAEAVLRSRAGLGRPQQPTGS
FLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVARLIGAPPGYVGHEEGG
QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNL
GAEHLLSGLMGKCTMQVARDRVMQEVRKHFRPELLNRLDEIVVFDPLSHDQLRKVARLQM
KDVAARLAERGIALAVTDAALDHVLAESYDPVYGARPIRRWLERRVVTELSRMLIKEEID
ENSTVFIDAGGDGDRLTYRVEKNGGLVDAQTGNKSDVLIQLKNGIRSDAAAQTVKKMKIE
EIDEDEMEQ
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctgataaattcacccacaagactaatgaggcactcgccggagctcacgagtta
gctttgaattctggtcatgcgcaactgacaccgcttcatttggcggttgctttgatttct
gatccgagtgggattttcagccaagcgatttctagttccggtggtgaaaatgcccaaaaa
gaagtggagacggtcttcaatcgagcattgaagaagcttccatctcaatcccctgcaccg
gatgaagtgccggcgagtacaactctgattaaggtgattcgaagggcacaagcggcacaa
aaatcgcgaggggacacgcatttagctgtcgatcaattggttcttggccttcttgatgat
tctcagattggggatttgctcaaagaagccggtgtcaccacggcgaaagttaaatccgag
gtcgagaaactacgtggaaaagaagggaagaaagtggagagtgcatctggagatacaaca
tttcaggcactcaaaacatatgggcgagacctggtagaacaagcggggaaactcgaccca
gttattggtagggatgaggaaattcgaagggtggtgagaatcttatcgagaaggactaag
aacaaccctgttcttattggggagcctggtgttggaaaaactgcagtggttgaaggatta
gcacaaagaattgtaagaggggatgttccaagtaatcttattgatgtgaggctcatagct
ttggatatgggtgctctggttgcgggagctaagtacaggggagagtttgaagagagactg
aaggctgtattgaaggaagttgaagatgcagaggggaaggttatactgttcatcgatgag
attcatcttgttcttggtgctggaagaacagaggggtcaatggacgccgctaaccttttc
aagcctatgctggctagagggcagctacgttgtattggggcaactactcttgaagagtac
aggaagtacgtggagaaggatgcggcatttgaaagaaggttccagcaggtttatgtggct
gaaccaagtgtgcctgatactatcagcatccttcgaggactcaaagagagatatgaaggt
catcatggtgttaggatacaagatcgagctcttgtcgttgcagcccagctttcgagtcga
tatatcactgggcgacaccttcctgataaggctattgatttagttgatgaagcttgtgct
aatgtgagggtccagcttgatagccagcctgaagaaattgacaacttggagaggaggcga
atgcagcttgaagttgaactccatgcgcttgaaaaggagaaggataaagctagtaaagct
cgtctggttgaagtgaggagagagctggatgatttgagggataagcttcagccattgctg
atgaaatatcgaaaggagaaagaaagggtagatgagattagaagactgaagcagaggagg
gaggaactacagatagctttgcaagaggctgaaagaagatatgatttagcaagagctgct
gacttgcgatatggagcaatccaggaagtagaatctgctatagcacggattgaagggaac
actgatgagaacctaatgttaaccgaaaccgtcggaccggaacaagtagcagaagttgtg
agccggtggactggaattcctgtcacgaggctcggccagaatgagaaagagaggctggtt
gggcttgctgagagattgcacaagagagttgtggggcagaatcaagcagttgatgctgtt
gctgaagctgttttacggtcaagagctggattgggaaggccacagcagccaactggttcc
ttcttgtttctgggtcctactggtgttggcaaaactgagcttgccaaggcgcttgctgag
caactttttgatgatgaaaacctcctggtgagaattgacatgtctgaatatatggagcaa
cactcggttgcgcgcctcatcggcgctcctcctgggtatgttggccatgaagaaggaggg
caactcacagaggctgtaaggcggaggccttacagtgttgtgctgtttgatgaagtggag
aaagctcacatctctgtgttcaacacccttctccaagttctagacgatgggagattgact
gatggtcaaggccgcactgtggatttcagaaacacagtcattatcatgacctctaacctt
ggagctgaacatctcctttctgggcttatgggaaaatgcacaatgcaagttgctcgtgat
cgagttatgcaggaggtgcggaaacacttcaggccagagctgcttaatcgtttggatgaa
attgttgtatttgaccctctctcgcacgaccagctgaggaaagttgccaggctgcagatg
aaagacgtcgcagcccgcctggccgagaggggaattgccttggccgtgacggatgctgcc
ctcgaccatgtcttggcagagagctacgatccggtatatggtgctagacccataagaaga
tggctggagaggagagtggtgacagagctatcgagaatgttgatcaaagaagaaatcgat
gagaattcgactgtgttcatcgatgcagggggtgatggggataggttgacgtacagagtg
gagaagaacgggggattggttgatgctcaaactgggaataagtctgatgtcttgattcaa
ctcaagaatggcataagaagcgacgctgctgctcagactgtgaagaagatgaagattgag
gaaattgatgaagatgagatggaacagtaa
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