Cucurbita pepo subsp. pepo (vegetable marrow): 111790921
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Entry
111790921 CDS
T05351
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cpep
Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep00040
Pentose and glucuronate interconversions
cpep01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cpep00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111790921
Enzymes [BR:
cpep01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
111790921
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
111790921
NCBI-ProteinID:
XP_023527818
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Position
LG03:complement(12149790..12154475)
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AA seq
449 aa
AA seq
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MTMAESGGWIRLFLLVVFMLFVGAIARIPKDIPEIDNEATGKLQSSSNSSMAVRLEEPEA
ETPGNKHAVDNPDEIAAMVDMSIRNATTRRELGFFSCGTGNPIDDCWRCDPNWQQNRKRL
ADCGIGFGRNAIGGRDGRFYVITDSGDDDPVNPRPGTLRHAVIQDEPLWIVFKRDMVIQL
KQELIMNSFKTIDARGSNVHIANGACITIQFVTNVIVHGLNIHDCKPTGNAMVRSSPNHV
GWRTIADGDAISIFGSSHIWIDHNSLSNCADGLVDAVMGSTAITITNNYFTHHNEVMLLG
HSDSYVRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTIN
SQGNRYAAPTNPFAKEVTKRVETAESEWKNWNWRSEGDLLMNGAFFTPSGAGASASYARA
SSLGAKSSSMVATITATAGALSCRRGHPC
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgacaatggcggaatctggagggtggattcgtttgtttcttctcgtggtgttcatgttg
ttcgtcggagcaattgcaagaattcccaaagacattcctgaaattgataatgaggcaacg
gggaagttgcagagctcaagcaactcatcaatggcagtgaggttggaggagcctgaggct
gagactcccggcaataagcatgccgtggacaacccagacgagatcgctgctatggttgac
atgagtatccgcaatgccactacgaggagagagcttggtttcttctcgtgtggaaccggc
aatcctattgatgactgctggcgctgcgaccccaattggcaacagaaccgcaaacgtcta
gcagattgtggcattggctttggccgaaatgccatcggtggtcgtgatggtcgattctac
gtcatcactgactctggcgacgatgaccctgtcaatccaaggcctggcactttgcgacat
gccgttatacaggatgaacctctctggatcgtgttcaaaagagacatggtgatacagctg
aaacaggagctgatcatgaacagtttcaagacaattgatgcccgtgggtccaatgtgcat
attgctaatggagcttgcatcacaatccagtttgtgaccaatgttattgtccatggtcta
aacatccatgactgcaagcccactggaaacgccatggtaaggagttcacccaatcacgtt
gggtggagaacaattgctgatggggatgccatttccatttttgggtcaagtcatatttgg
attgatcacaattccctctctaactgtgctgatggcctcgttgatgctgtcatgggatcc
accgcaattaccatcaccaacaattacttcacccaccacaatgaggtgatgttattggga
catagtgattcttacgttagagataaacaaatgcaagtgaccattgcttacaatcacttt
ggagaaggactcatccaaagaatgccaaggtgtagacacggatactttcatgtagtgaac
aatgattatactcactgggaaatgtacgccattggtggaagtgcaaatccaaccatcaac
agccagggtaacagatatgctgctccaaccaatccatttgcaaaagaggtgaccaagaga
gttgagacagctgaatctgagtggaaaaactggaattggagatcagaaggagacctattg
atgaatggtgcttttttcactccatctggtgcaggggcctcagcaagctatgctagagcc
tcaagcttgggagcaaaatcttcatccatggttgctaccataacagccaccgccggtgca
ctttcctgccggagaggccatccctgctag
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